Gene RPD_1047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1047 
Symbol 
ID4021523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1200371 
End bp1201105 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content66% 
IMG OID637961239 
ProductABC transporter related 
Protein accessionYP_568186 
Protein GI91975527 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCTGC TTGAGGCGCG GGGCCTGATC AAGATCTTCG GCAAGCTCAC CGCCCTGAAC 
GGCGCCGAGC TGATCATCCA GCCGAACGAG TTCCACGGCC TGATCGGTCC GAACGGCTCC
GGCAAGAGCA CGATGATGAA ATGCATCGCC GGCGCCGAAG TGCCGACGCA GGGCCGCGTC
AGCTTCGACG GTCAGGACAT CACCGCGGCA TCGCCGGCCG AGCGCGCCCG CCGCGGGATG
AGCCTGAAAT TCCAGATCAC CAGCGTGCTG CCGGCGCTGA CGCTCTATGA CAACGTGTTG
CTGGCGCTGC AGGGCCAGAC CGCGTTGTCG AAGCTGATGT TCTCGCGCAC CCGCGGGCTG
TTGCACGACA AGGTGATGGC GATGCTGGAG CAGTTCCGGC TGGTCGAGCG CGCCGGTGAG
CGGGCGGGAG CGCTGTCGCA CGGCCAGCAG CAATGGCTCG AGATCGCGAT GGCGCTTGCG
CCGGAGCCGA AGCTACTGCT GCTCGACGAG CCGACCGGCG GCATGAGTCT GGAGGAGCGC
CGCGTCACCG GCGAATTGCT GGCGCCGATC AAGTCGCGCT GCTCGCTAGT GATCGTCGAG
CACGACCTCG ATTTCATCCG CGACATCTGC GACCGCCTCA CCGTGCTCGA TCAGGGCGCG
GTGCTCGACA CCGGCTCGAT CGAGCAGATT CAGGCGAGCC CGAAGGTCCA GGAGGTTTAT
CTGCGCCGTG CCTGA
 
Protein sequence
MALLEARGLI KIFGKLTALN GAELIIQPNE FHGLIGPNGS GKSTMMKCIA GAEVPTQGRV 
SFDGQDITAA SPAERARRGM SLKFQITSVL PALTLYDNVL LALQGQTALS KLMFSRTRGL
LHDKVMAMLE QFRLVERAGE RAGALSHGQQ QWLEIAMALA PEPKLLLLDE PTGGMSLEER
RVTGELLAPI KSRCSLVIVE HDLDFIRDIC DRLTVLDQGA VLDTGSIEQI QASPKVQEVY
LRRA