Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1047 |
Symbol | |
ID | 4021523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 1200371 |
End bp | 1201105 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637961239 |
Product | ABC transporter related |
Protein accession | YP_568186 |
Protein GI | 91975527 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTCTGC TTGAGGCGCG GGGCCTGATC AAGATCTTCG GCAAGCTCAC CGCCCTGAAC GGCGCCGAGC TGATCATCCA GCCGAACGAG TTCCACGGCC TGATCGGTCC GAACGGCTCC GGCAAGAGCA CGATGATGAA ATGCATCGCC GGCGCCGAAG TGCCGACGCA GGGCCGCGTC AGCTTCGACG GTCAGGACAT CACCGCGGCA TCGCCGGCCG AGCGCGCCCG CCGCGGGATG AGCCTGAAAT TCCAGATCAC CAGCGTGCTG CCGGCGCTGA CGCTCTATGA CAACGTGTTG CTGGCGCTGC AGGGCCAGAC CGCGTTGTCG AAGCTGATGT TCTCGCGCAC CCGCGGGCTG TTGCACGACA AGGTGATGGC GATGCTGGAG CAGTTCCGGC TGGTCGAGCG CGCCGGTGAG CGGGCGGGAG CGCTGTCGCA CGGCCAGCAG CAATGGCTCG AGATCGCGAT GGCGCTTGCG CCGGAGCCGA AGCTACTGCT GCTCGACGAG CCGACCGGCG GCATGAGTCT GGAGGAGCGC CGCGTCACCG GCGAATTGCT GGCGCCGATC AAGTCGCGCT GCTCGCTAGT GATCGTCGAG CACGACCTCG ATTTCATCCG CGACATCTGC GACCGCCTCA CCGTGCTCGA TCAGGGCGCG GTGCTCGACA CCGGCTCGAT CGAGCAGATT CAGGCGAGCC CGAAGGTCCA GGAGGTTTAT CTGCGCCGTG CCTGA
|
Protein sequence | MALLEARGLI KIFGKLTALN GAELIIQPNE FHGLIGPNGS GKSTMMKCIA GAEVPTQGRV SFDGQDITAA SPAERARRGM SLKFQITSVL PALTLYDNVL LALQGQTALS KLMFSRTRGL LHDKVMAMLE QFRLVERAGE RAGALSHGQQ QWLEIAMALA PEPKLLLLDE PTGGMSLEER RVTGELLAPI KSRCSLVIVE HDLDFIRDIC DRLTVLDQGA VLDTGSIEQI QASPKVQEVY LRRA
|
| |