| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1044 |
|---|
| Symbol | |
|---|
| ID | 4021520 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 1197179 |
|---|
| End bp | 1198036 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637961236 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_568183 |
|---|
| Protein GI | 91975524 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAACC TGATCGTCGC ATTGTTCGAA ATTCTGAGCT TCGGCGCCAT CGTCGTGCTG
GTGGTGCTGG GGCTCGGGAT CATCGCCAGC ATGATGGGCA TCTTCAACTT CGCGCAGGGT
GAGTTCGTCC TGCTCGGCGC CTACACAACC TATCTCGCTT ACACCGCCGG CTTGCCGGTC
TGGGCCGGGA TGCTCGCGGC GCCGTTCGTG GTCGGTGCGC TGGGATTCGT TCTCGAACGA
CTGGTCGTGC GCCGGTTCTA TGCCGCGCCG ATCGTCGCGA TGCTCGGCAC CTATGCGCTC
GGCCTGATCA TCCGCGAAAT CGTCCGCGGC CTGATCGGCG GTCTGTATAT TTCGGTGCCG
GAGCCGATCG GCGGCTCGGT CGCGCTGGGC TCGATGCATT TCTCGATCTG GCGGCTGGTG
ATCATCGTCG TCACCGCGCT GGTGATGGTG GGGAGCTATC TGCTGCTGTC GCGCACCTCG
TTCGGCCTGC GCGTCCGCGC CTCGCTGGAA AATCCGGCGC TGGCGCGCGC CTCCGGCATT
TCCACCAGCG CGATCTACGG CGCGACGTTC GCGTTCGGCG CGGCGCTGGC CGGCCTCGCC
GGGGCTTTGA TCGTGCCGGT GTTCTCGCTG TTCGCCGATC TCGGCCTGCG CTTCCTGATC
CAGGGCTTCG TCGCGGTCAT GGTCGGCGGC ATCGGCTCGT TCGCGGGCCC GGTGGCCGGC
GCCGGTGTCA TCGGCACGCT CTCGGCGGCG CTGCCCTGGG TGATCCAGCC TGTCATCGCC
GACGTTCTCG TCTTCGTCCT CGCCATCATC TTCATCAAGT TCCGGCCGCA GGGCCTCGTT
TCGGGAAAAG GGATCTAG
|
|---|
| Protein sequence | MENLIVALFE ILSFGAIVVL VVLGLGIIAS MMGIFNFAQG EFVLLGAYTT YLAYTAGLPV
WAGMLAAPFV VGALGFVLER LVVRRFYAAP IVAMLGTYAL GLIIREIVRG LIGGLYISVP
EPIGGSVALG SMHFSIWRLV IIVVTALVMV GSYLLLSRTS FGLRVRASLE NPALARASGI
STSAIYGATF AFGAALAGLA GALIVPVFSL FADLGLRFLI QGFVAVMVGG IGSFAGPVAG
AGVIGTLSAA LPWVIQPVIA DVLVFVLAII FIKFRPQGLV SGKGI
|
|---|
| |