| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1043 |
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| Symbol | |
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| ID | 4021519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1195621 |
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| End bp | 1197135 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637961235 |
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| Product | amidase |
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| Protein accession | YP_568182 |
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| Protein GI | 91975523 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.886145 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCAGTTT CACTTCCCAC ACCCATGCAG CTACTCGATG TCGCCGAACA ATGCGGCCTG
TCGCTCACCG ACGAGGACGT CGCGTCGTTT CGCGCGCTGA TGCAGCCCTC GGTCGAAGCC
TACAATGTGG TGGCGGCTCT GCCGGACGAA GTCCCGCTTG TGAAGTATCC GCGAACGCCG
GGCTATCAGC CCGGCCCCGA AGACAATCCG CGCAACGCCT GGTATCGCAA GGCGAGCGTG
AAGGGCGCGG CCGCCGGCAA GCTCAAGGGC AAGACAATCG CGCTCAAGGA CAACATCATG
CTGGCCGGCG TGCCGATGAT GAACGGCTCC TCGACGCTCG AAGGCTTCGT TCCGGATTTC
GACGCCACCG TCGTCACCCG CATCCTCGAT GCCGGCGGCG AGATCCTCGG CAAGGTGCAT
TGCGAGCATT TCTGCATGTC CGGCGGCAGC CACACCGGCT CCAACGGTCC GGTGCACAAC
CCGCACAAGA TGGGTTACTC GGCCGGCGGT TCGTCGTCCG GCAGCGCCGT CGTGGTCGCG
CTCGGCGAGG CCGACATGGC GATCGGCGGC GATCAGGGCG GCTCGATCCG GATGCCGGCG
TCGTTCAGCG GCATCTACGG CATGAAGCCG ACCTGGGGCC TCGTGCCCTA CACCGGCATC
ATGCCGATCG AGGTGTTCGT CGACCACACC GGTCCGATGA CCGCGAACGT CGCCGACAAC
GCGCTGCTGC TCGAAGTGCT CGCCGGCGAC GACGGCTACG ATCCGCGGAT CCGTGCGCCC
AAGCTGCACG ACTACACCAA GGCGCTGGGC GGCGGCATCA AGGGCATGAA GATCGGCATC
GTCAGGGAAG GCTTCGAGCA GGCCGGCGCC GAACCCGGTG TCAACGAAAG CGTGCGCGGA
GCCGCCAAGC GGCTCGCCGG CCTCGGCGCG ACTGTCGAGG AGATCTCGAT TCCGGCGCAC
AATCTTGCCG GCGCGGTATG GATGCCGATC GGCACCGAGG GCATGACCCA GACCATGATG
TTCGGCGACG GCTACGGCCT CAGCCGGCCG GACCTTTATT CGACCGCGCT GATGAAGGCG
CATCGCGGCT GGCGCGGCCA GGCCGACTCC TTGTCCGAGA CCACCAAGAT GATGCTGCTG
TTCGGCACCT ACATCAACAA CACCTTCGGC CCGCGTTATT ACGGCAAGGC GCAGAACATC
TCGCGGCGGA TCGGCGCGGC CTATGATCAG GCGCTGGCGA GTTTCGATCT GTTGCTGATG
CCGACCACGC CGATGAAGGC GACGCCGCTG CCGTCGCCCG GCGCCAGCCG TGAGGAAATC
ATCGGCCGCG CCTTCGAGAT GATCAGCAAC ACCGCGCCGT TCGACATCAC GCATCACCCG
GCGATGTCGA TTCCGTGCGG CATGGTCGAC GGCCTGCCGG TCGGCCTGAT GCTCGTCGGC
AAGCATTTCG ACGAGCCGAC GATCTACCGC GCGGCGCACG CCTTCGAGCA GTCCGGCGAC
TGGAAGACGA TGTGA
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| Protein sequence | MAVSLPTPMQ LLDVAEQCGL SLTDEDVASF RALMQPSVEA YNVVAALPDE VPLVKYPRTP
GYQPGPEDNP RNAWYRKASV KGAAAGKLKG KTIALKDNIM LAGVPMMNGS STLEGFVPDF
DATVVTRILD AGGEILGKVH CEHFCMSGGS HTGSNGPVHN PHKMGYSAGG SSSGSAVVVA
LGEADMAIGG DQGGSIRMPA SFSGIYGMKP TWGLVPYTGI MPIEVFVDHT GPMTANVADN
ALLLEVLAGD DGYDPRIRAP KLHDYTKALG GGIKGMKIGI VREGFEQAGA EPGVNESVRG
AAKRLAGLGA TVEEISIPAH NLAGAVWMPI GTEGMTQTMM FGDGYGLSRP DLYSTALMKA
HRGWRGQADS LSETTKMMLL FGTYINNTFG PRYYGKAQNI SRRIGAAYDQ ALASFDLLLM
PTTPMKATPL PSPGASREEI IGRAFEMISN TAPFDITHHP AMSIPCGMVD GLPVGLMLVG
KHFDEPTIYR AAHAFEQSGD WKTM
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