Gene RPD_1036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1036 
Symbol 
ID4021512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1187873 
End bp1189414 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content67% 
IMG OID637961228 
ProductFAD linked oxidase-like 
Protein accessionYP_568175 
Protein GI91975516 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAAGG CCCTGCCCAT TTCATCGCGA CAGCCGCCGG CGCTGCCGGG AGGCGTGATG 
ACGCGCGCGC AATTCCGCGG CGAGACGCTC AGCGGCCGCG CCGTCGCGGT GTCGGACGCC
ACGATCCGAC AGCTGGAGGC CATCTGCCCG ACCCGCGTGG ATGACAACAG CCTGTTCGAC
TATGCGCGCG ACTGGTGGCC TCTGGGTCTG GTCTGGTCGA CGAGCGGTCA TGTCGCGCGG
CTGCCGTCGG CCGTGGTGAT GCCGTCGTCC GTCGACCAGA TCGCAGCCGT GCTGCGGATC
TGCAACGAGG CGCGCATTCC GGTCGTCGCG GCCGGCGGGC GCTCCGGCGT GCTTGGAAAC
TCGCTTCCGG TTTTCGGCGG CGTCGTGCTC GATACCACAC AGCTGTCTGG TATCCTCGAT
CTGCGGGAAG ACGATCTCGT GGTCGACGTC CAGGCCGGCA CGTTCGGCGA CGATTTCGAA
ACCACGATGC AGGCCGCGGG CTACACCGCG GGGCATTGGC CGCAGTCGAT CGCGCTGTCC
ACCGTGGGCG GATGGATCGC CTGCCGTGGC GCGGGGCAGA TGTCGAGCCG GTACGGCACG
ATCTCCGACA TCACCATGAG CGTGACGGCC GTTCTCGCCG ATGGCAGCGT CATCGATACC
AGCGATTATT CGCACTCCGC GACCGGGCCC GACCTCACGC AACTCTTCGT CGGCTCGGAG
GGCACGCTCG GCGTCATCAC CTCGGCCCGC CTGCGGATCT CGCCGAAGTC CGATCACGCC
CGCAATGCGG CGTTCGCCTT CCCGAGTTTC GCGGCGGGGG TGGCGGCGAT CCGCCGCTTC
GTACGCCGAG GGATGTCGCC TGCGATCGTG CGGCTTTACG ACCAGGTCGA ATCGCGGCGC
AATTTCGGAA CCACCAATCA ATGCGTGCTG ATCTTGCGCG ACGAGGGCGA TCCGGCCCTG
ATCGACGGAC CCTGGCAAGC CGTTCTGGAG TCGTGCGACG GCGAGGCGCT CGGCGATGCT
CTGGTCAAGC AATGGATGTC GCATCGTAAC AACGTCAGCA CGATGGGCGA ACTGATCGCC
GATCGCGCGC CGGATACGAT GGAAGTCGCC GCGCCGTGGT CGCGGGTGGT CGAAATCTAC
GAGAAGACCA CCGCCGCCAT TTCGGCGATC GACGGCTCGC GCACTGCGAC CGCGCATATC
TCGCACGTCT ATTCCGATCG GGTCGGGCTG TATTTCATGT TCGGCGGCCG CCCCGAACTG
AACGCGCGTC CGGGATGGTA CCGTCAGGTG TGGGACGCGG CCGCCACCAC CGTGCTGCAG
AATGGCGGCA ATCTCAGCCA CCATCATGGC ATCGGCCTCG GCCGCGGACG TTTCATGCGG
TCCGCGCTGG GCAGCAGCTT CGATGTTCTG GATCGGGTGA AGTCGGCGCT CGATCCGAAC
CGGATTTTGA ACCCCGGCAA GATGGGCCTC GACAGTCCGT TCGGTCCGCC ACCGGTGTGG
TCGGATGACG TGACCGTTCC GCCCAAGACC GAGGCGCCGT GA
 
Protein sequence
MPKALPISSR QPPALPGGVM TRAQFRGETL SGRAVAVSDA TIRQLEAICP TRVDDNSLFD 
YARDWWPLGL VWSTSGHVAR LPSAVVMPSS VDQIAAVLRI CNEARIPVVA AGGRSGVLGN
SLPVFGGVVL DTTQLSGILD LREDDLVVDV QAGTFGDDFE TTMQAAGYTA GHWPQSIALS
TVGGWIACRG AGQMSSRYGT ISDITMSVTA VLADGSVIDT SDYSHSATGP DLTQLFVGSE
GTLGVITSAR LRISPKSDHA RNAAFAFPSF AAGVAAIRRF VRRGMSPAIV RLYDQVESRR
NFGTTNQCVL ILRDEGDPAL IDGPWQAVLE SCDGEALGDA LVKQWMSHRN NVSTMGELIA
DRAPDTMEVA APWSRVVEIY EKTTAAISAI DGSRTATAHI SHVYSDRVGL YFMFGGRPEL
NARPGWYRQV WDAAATTVLQ NGGNLSHHHG IGLGRGRFMR SALGSSFDVL DRVKSALDPN
RILNPGKMGL DSPFGPPPVW SDDVTVPPKT EAP