| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1032 |
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| Symbol | |
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| ID | 4021508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1182373 |
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| End bp | 1183398 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637961224 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_568171 |
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| Protein GI | 91975512 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.284122 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCGCA AAATCATATC AGGCGTCGTG GCGCTGGCGG TTGTGGGCAC CGCGTCGGCC
CTCGTCGCGC AACCGGCGTC GATCACCATC GTCAATCCGG GCGGCCCCTA TCTCGAGGCG
ACGCTGGAGG CCTGGGGCAA GACCTTCACC GAGAAGACCA ACATCAAGGT GAAGGGCGAC
TCCCCGCAGA GCCTGCCGAA GATCCAGCAG ATGGTCGGCG CCAAGAACGT GTCGTGGGAT
GTCGTCGAAG TGCCGCCGGT GTTCACGATG CGCCATTGCG GCACGCTGTT CGAAAAGCTC
ACGCCCGGTC TCGTCGACGC GGCGCGCGTC AATGCGGGAT TCGGCAATGA ATGCGGCGTG
CCGGATGCGG GCTACGCCAA CATCATGCTC TACAACAAGA CCAAGTTCGC AAAGGGCGGC
CCGCAGAACT GGGCCGACTT CTTCGACGTC AAGAAGTTTC CCGGCAAGCG CGGCCTGTGG
GACGGCGCCG AGGGCGTGAA TCTCGAAATC GCGCTGCTGG CCGACGGCGT TGCTCCGGAG
AACCTCTATC CGCTCGACCT GGATCGCGCG TTCCGCAAGC TCAGCGAACT CAAGCCGCAT
ATCGTGTTCT GGCGAACCGG CGCGCAATCC ACCCAGATGA TGGAAAGCGG CGAAGTCGAC
ATGATCATGG CGTGGTCGTC GCGCGCCTAT CCGGCGCTGA AGAACGGCGC GCCGTTCGAG
CCGGTGTGGA ACCAGCACAT CATCTACAAC AACGTTCTGG CGATTCCGAT GGGCGCGCCG
AACAAGGCCG CCAGCGAAGC CTATATTCGC CATGCGCTCG AGGACAAACA GCAGGCCCGC
ATCACCGAGC TCTATCCGGT CACGCCCGCG CTGATCGGCG CCGCTCCGAA GCTCGACGAG
GCAGGCATGA AAGTCTTCGC CGGCACGCCT GAGCGGGCCA AGACCGCGAT CCGCCTCAAT
CTGAAATGGG TCGCCGACAA TTCCGAAGTG ATCCAGAAGC GCTGGATCGA GTGGTTGAAC
TCCTGA
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| Protein sequence | MSRKIISGVV ALAVVGTASA LVAQPASITI VNPGGPYLEA TLEAWGKTFT EKTNIKVKGD
SPQSLPKIQQ MVGAKNVSWD VVEVPPVFTM RHCGTLFEKL TPGLVDAARV NAGFGNECGV
PDAGYANIML YNKTKFAKGG PQNWADFFDV KKFPGKRGLW DGAEGVNLEI ALLADGVAPE
NLYPLDLDRA FRKLSELKPH IVFWRTGAQS TQMMESGEVD MIMAWSSRAY PALKNGAPFE
PVWNQHIIYN NVLAIPMGAP NKAASEAYIR HALEDKQQAR ITELYPVTPA LIGAAPKLDE
AGMKVFAGTP ERAKTAIRLN LKWVADNSEV IQKRWIEWLN S
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