| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1027 |
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| Symbol | |
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| ID | 4021502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1169106 |
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| End bp | 1169915 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637961218 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_568166 |
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| Protein GI | 91975507 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1877] Trehalose-6-phosphatase |
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| TIGRFAM ID | [TIGR00685] trehalose-phosphatase
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.794711 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCGA AGCTCGCCGA AACTTCATCG CGGCCCACGA CCAATTCCGT GCCGGTGCCG
AGCGCGTTGG TGCCGCATCT CGATCAGTGC GCGATGCTGC TGGACATCGA CGGCACCCTG
CTCGATCTCG CCCCGACGCC GCGCGAAGTC TGGGTTCCAC CGGAACTCGA GCGAACGCTG
CGCGGGCTGC ACGCGCGAAC CTCCGGCGCG CTGGCGCTGG TCAGCGGCCG GTCGATCAAC
GACATCGACC TGATCTTCGC GCCGCTGAAG TTGCCCGCGG TCGGCGGCCA CGGCGCGGAG
ATGCGACTGT TGTCCGGCGG CGATCTGGTA TCGACCCACG CGCCGCCGAT GGATCCCGAA
TTGAAGAACC GTCTCGCCGC GATCGCGCGG ATCAGCCCCG GTATTTTGCT GGAAGACAAG
GGCTACTCAC TGGCGTTGCA CTATCGTCTG GCGCCCCACA CCGAGAAGGC GATCTACGAA
TCCGTCGCGG CGATCCGCGC CGAGAATCCG CACGCGCCGC TGGAAGTCTT GCCCGGCAAG
TCGGTGTGCG AGATCAAGCA TTCCGGTTTC ACCAAAGCCA CCGGCGTGAT CGAGCTGATG
AAGCACGAGC CGTTCAAGGG GCGCCGGCCG GTGTTCCTCG GCGACGACGT CACCGACGAA
ACAGTGTTTG CGATCATGCC GGAACTACGC GGCCTGGCGT TTTCGGTCGG ACGCCACAGC
GACATGGTCG CGGGACATTT CGACGAGCCG CGCGACGTGC GCGCGTGGCT CGCGCGTCTG
CTCGATCCGC AGCAGGCTTC CGCAACTTAA
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| Protein sequence | MTSKLAETSS RPTTNSVPVP SALVPHLDQC AMLLDIDGTL LDLAPTPREV WVPPELERTL
RGLHARTSGA LALVSGRSIN DIDLIFAPLK LPAVGGHGAE MRLLSGGDLV STHAPPMDPE
LKNRLAAIAR ISPGILLEDK GYSLALHYRL APHTEKAIYE SVAAIRAENP HAPLEVLPGK
SVCEIKHSGF TKATGVIELM KHEPFKGRRP VFLGDDVTDE TVFAIMPELR GLAFSVGRHS
DMVAGHFDEP RDVRAWLARL LDPQQASAT
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