| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1026 |
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| Symbol | |
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| ID | 4021501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1167625 |
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| End bp | 1169109 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637961217 |
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| Product | major facilitator transporter |
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| Protein accession | YP_568165 |
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| Protein GI | 91975506 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.76492 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGTC CGAACAGCGC CGTGATGAGA GAGCCGCCGC CGCAGGCCGT CGGTGGCCGT
GTCATCGAAA CCGATATTCC GGCGCGATTG GACGGCCTGC TGTGGAGCGG CTTCCACACC
CGCGTGGTGT TCGCGCTCGG CGTCACGTGG ATTCTCGACG GCCTCGAAGT CACGCTGGCA
GGTTCGCTGT CGGGCGCGCT GAAAGCCAGC CCGCAGCTTC AGTTCTCCAA TCTCGACATC
GGCTTCGCCA CCAGCGCCTA TCTGGCGGGC GCTGTGCTGG GCGCGATCGG GTTCGGCTGG
CTGACCGACC GGATCGGCCG CAAGAAATTG TTCTTCATCA CGCTCGCGCT GTATCTCACC
GCCACCGCGG CGACGGCGCT GTCGTGGGAT CTCTGGAGCT ACGCGCTGTT TCGTTTTCTC
ACCGGGGCGG GAATCGGTGG CGAATACACG GCGATCAACT CGACGATCCA GGAGCTGATG
CCGGCGCGCT ATCGCGGCTG GACCGATCTG GTGATCAACG GCAGCTTCTG GATCGGTGCG
GCGATCGGTG CAATCAGCGC CATCGTGCTG CTCGATCCGG CTGTGATCGA TCCCGAACGC
GGCTGGCGTC TGGCGTATCT GATCGGAGCG GCGCTCGGAC TGATCGTATT CGCGATGCGG
TTCTGGATTC CCGAAAGTCC GCGCTGGCTG ATGATCCATG GCCGTCCGGA GGAAGCCGAA
GCGATCGTCG CCGACATCGA GAAGACGGCG CGCGCAGCGC CGGAGGCCGA GCATCGCAAC
CCGTCGAAGA TCAGGTTGCA GATGCGCAGC CACACGCCGC TGCGTGAGGT CGCCCATACG
CTGTTCACGA CATACCGGCA GCGCTCGATC GTCGGGCTGA CGCTGATGGC GGCGCAGGCG
TTCTTCTACA ACGCGATCTT CTTCACCTAC GCGTTGGTGC TGACCGATTT CTTCGGCATC
CCGTCCGGCG ACGTCGGCTG GTACATCCTG CCGTTCGCGG CCGGAAACTT CCTCGGACCG
CTGCTGCTCG GCCGGCTGTT CGACACGCTC GGACGCCGCA AGATGATCGC CTTCACCTAC
GGCGCTTCTG GAATCCTGCT CGCCGTGTCC GGTTATCTGT TCTCGATCGG CGCCCTGAGC
GCGCAGGGAC AGACGATCGC CTGGATGGTG ATCTTCTTCT TCGCGTCGCC GGCGGCGAGT
GCGGCCTATC TCACCGTCAG CGAGACCTTC CCGCTGGAGG TCCGGGCGCT GGCGATCGCA
TTGTTCTACG CATTCGGCAC CGGAATCGGC GGCGTCGCCG GCCCGGCGCT GTTCGGGGCG
CTGATCGACA CCGGTTCGCG CACGAGCGTG TTTGCCGGCT ATCTGCTCGG CGCGAGTCTG
ATGATGATCG CCGCTGTGGT CGGTTGGCGT TATGGTATTG CGGCTGAACG CCGGTCGCTT
GAACACATTG CGCGGCCGCT GGCCGCCGTA GAGGAAAGCC GATGA
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| Protein sequence | MASPNSAVMR EPPPQAVGGR VIETDIPARL DGLLWSGFHT RVVFALGVTW ILDGLEVTLA
GSLSGALKAS PQLQFSNLDI GFATSAYLAG AVLGAIGFGW LTDRIGRKKL FFITLALYLT
ATAATALSWD LWSYALFRFL TGAGIGGEYT AINSTIQELM PARYRGWTDL VINGSFWIGA
AIGAISAIVL LDPAVIDPER GWRLAYLIGA ALGLIVFAMR FWIPESPRWL MIHGRPEEAE
AIVADIEKTA RAAPEAEHRN PSKIRLQMRS HTPLREVAHT LFTTYRQRSI VGLTLMAAQA
FFYNAIFFTY ALVLTDFFGI PSGDVGWYIL PFAAGNFLGP LLLGRLFDTL GRRKMIAFTY
GASGILLAVS GYLFSIGALS AQGQTIAWMV IFFFASPAAS AAYLTVSETF PLEVRALAIA
LFYAFGTGIG GVAGPALFGA LIDTGSRTSV FAGYLLGASL MMIAAVVGWR YGIAAERRSL
EHIARPLAAV EESR
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