Gene RPD_1024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1024 
Symbol 
ID4021499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1164668 
End bp1165165 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content61% 
IMG OID637961215 
Product(2Fe-2S)-binding 
Protein accessionYP_568163 
Protein GI91975504 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.89544 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCAAAG TCTCACTGAC TGTCAACGGG AAAGCCGTCA CGGCGGAGGT CGAGGATCGT 
ACCCTCCTCG TCCATCTCTT ACGCGATCAT CTGAACCTGA CCGGCACCCA TGTCGGCTGC
GACACCAGCC AATGCGGCGC CTGCATTGTG CATATCGACG GCCGCGCGGT GAAATCCTGC
ACCACCTTGG TCGGCCAGGC CAACGGCGCC AACATCACCA CCATCGAAGG CATTTCGAAA
GGCGACGAGC TGCACCCGAT GCAGGCCGCG TTCCGCGACA ATCACGGCCT GCAATGCGGT
TACTGCACGC CGGGCATGAT CATGTCGGCT ATCGACATCG TCAATCGCCA CCATTCTTCA
ACTGGCGGCG ACCTCGACGA GGAGACCGTC CGGCAGGAAC TCGAAGGCAA TATCTGCCGC
TGCACCGGCT ATCATAACAT CGTCAAGTCA GTGCTCGACG CGGCCTCCCG CATGAAGGTG
GCGCAGGCCG CCGAATAG
 
Protein sequence
MSKVSLTVNG KAVTAEVEDR TLLVHLLRDH LNLTGTHVGC DTSQCGACIV HIDGRAVKSC 
TTLVGQANGA NITTIEGISK GDELHPMQAA FRDNHGLQCG YCTPGMIMSA IDIVNRHHSS
TGGDLDEETV RQELEGNICR CTGYHNIVKS VLDAASRMKV AQAAE