| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1021 |
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| Symbol | |
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| ID | 4021496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1160103 |
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| End bp | 1161218 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637961212 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_568160 |
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| Protein GI | 91975501 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.751913 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.624995 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAAGACA CAACGACCGC TTCCGCCACG CCGCAAACCG CCAGCCGCCC CAGCGGACCG
CTGTCCGGCA TCCGCATCGT CGAATTCGCC GGCATCGGAC CCGGACCGTT CGGCTCGATG
CTGCTGGCCG ACATGGGCGC CGAAGTCATC ACGCTGGTGC GCGCCGGACA GACGCCGCGT
GGCGCCGCTG CGCGCGGACG CAAGATCGTT ACGGTCGACC TCAAGGACAA GGATTCGGTC
GCCGGCGTGC TGACGCTGCT CGACAATGCC GATGCGCTGA TCGAAGGCTA TCGCCCGGGC
GTGATGGAAC GGCTCGGCCT TGGTCCCGAC GTCGTGCTCG GCCGCAACCC GCGGCTCGTT
TACGGCCGGA TGACCGGCTG GGGCCAGAGC GGCCCGCTCG CCCAGGCCGC CGGGCACGAC
ATCAACTACA TCTCGATCAC CGGCGCACTC GCGGCGATCG GCCCGGCGGA GAGGCCGGTG
CCGCCGCTCA ATCTGGTCGG CGATTTCGGC GGCGGTTCGC TGTACCTCGT GGTCGGCCTG
CTCGCGGCGC TGCTCGAGGC GAAAACGTCC GGCAAGGGCC AGGTGGTCGA CGCCGCGATG
TGCGACGGCG CCGCCTCGCT GATCACCATG TTCTTCGACA TGGTGGCGGC CGGCCGCTGG
AAAGAGAGCC GCGAAAGCAA CATGCTCGAC GGCGGCGCGC ATTTCTACGG CGTCTACGAA
TGCGCGGACG GGCACTTCAT CTCGATCGGC TCGATCGAGC CGCAGTTCTA CGCGCTGCTG
CGCGAACTCG CGGGGCTGAC CGATCCGCAA TATGACGGCC AGATGGACCC GAAGAACTGG
CCGGCGCTGA AACAGAAGCT GACCGCCTTG TTCAAGACCA AGACGCGGGA CGAATGGTGC
AAGCTGATGG AAGGCACAGA CGTCTGCTTC GCACCGGTGC TGACGATGTC GGAAGCCACA
CAGCATCCGC ACATGGTCGC GCGCGAGGTG TTCATCAAGC AGGGCGGCCA CACCCAGCCC
GCGCCCGCGC CGCGTTTCTC GCGCACGCCA TCGTCGGCGC GTCTGCCGAT CGAAGCCGAT
CTCGCCGGCG TCGCGAAGGA ATGGAGCGGG CGATAG
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| Protein sequence | MQDTTTASAT PQTASRPSGP LSGIRIVEFA GIGPGPFGSM LLADMGAEVI TLVRAGQTPR
GAAARGRKIV TVDLKDKDSV AGVLTLLDNA DALIEGYRPG VMERLGLGPD VVLGRNPRLV
YGRMTGWGQS GPLAQAAGHD INYISITGAL AAIGPAERPV PPLNLVGDFG GGSLYLVVGL
LAALLEAKTS GKGQVVDAAM CDGAASLITM FFDMVAAGRW KESRESNMLD GGAHFYGVYE
CADGHFISIG SIEPQFYALL RELAGLTDPQ YDGQMDPKNW PALKQKLTAL FKTKTRDEWC
KLMEGTDVCF APVLTMSEAT QHPHMVAREV FIKQGGHTQP APAPRFSRTP SSARLPIEAD
LAGVAKEWSG R
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