Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1017 |
Symbol | |
ID | 4021492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 1155606 |
End bp | 1156556 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637961208 |
Product | beta-lactamase-like |
Protein accession | YP_568156 |
Protein GI | 91975497 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.751913 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.383116 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAAAG GTTTCGCCTC CACCACCGAT CTCACCGAAA AGAAGGTGAC GTTCTCCGAG ATCGGTCCCG ATCTCTACGC TTTCACCGCG GAGGGCGATC CGAATTCGGC GGTGATCGTC GGCGAGGACG GCTGTCTGGT GTTCGACGCG CAGGCGACGC CGGCGATGGC CAACAAGGTG ATCGAGCGGG TCCGCTCCGT CACCGACAAG CCGATCAAAT ACGTCGTGCT GTCGCATTAT CACGCGGTGC GCGTGCTCGG CGCCTCGGCC TATCAGGCGG AGGGCATCGT CGCCTCGCAG GAAACCTGGC GGCTGATCGA GGAGCGCGGC CAGCAGGATT GGGATTCCGA ATACGGCCGG TTTCCGCGGC TGTTCCAGGA CGCCGAGAGC ATTCCCGGCC TGACCTGGCC GACGCTCACC TTCGACGGCG AAATGTCGAT CTATCTCGGC AAGCGTGAAG TGCGCCTGAT GCAGCTCGGC GCCGGTCATA CATCGGGCGA TATCGTCGCC TGGGTGCCCG ACGCCGAGGT GATGTTCACC GGCGACCTCG TCGAGTACCA CTCGGCCTGT TACTGCGGCG ACGCTTACTT GCGGGAATGG CCGATGACGC TCAATGAAAT CCGCGAGTTC AATCCCAAGG CGATCGCGCC GGGCCGTGGC GATGCGCTGA AAGGCCTGGA GACGACGCGC GAGGCGATTG CGATGACGCG CGATTTCGTC GGCACGCTGT ATGGCGCCGC CGAAATCTCC GCCGCCAAGG GCCGCAGCCT GAAGGAGACC TGGGACGCGA CCCGCGAAAA GATGGACCCG AAATTTTCGA GCTTCGCAAT CTACGAGCAC TGTCTGCCGT TCAACGTCTC GCGCGCCTTC GACGAAGCCT CCGGCATCGA CGATCCGGTG ATCTGGACCG CCGAGCGCGA TCGCGAGATG TGGGCGGCCC TGCAAGGGTG A
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Protein sequence | MAKGFASTTD LTEKKVTFSE IGPDLYAFTA EGDPNSAVIV GEDGCLVFDA QATPAMANKV IERVRSVTDK PIKYVVLSHY HAVRVLGASA YQAEGIVASQ ETWRLIEERG QQDWDSEYGR FPRLFQDAES IPGLTWPTLT FDGEMSIYLG KREVRLMQLG AGHTSGDIVA WVPDAEVMFT GDLVEYHSAC YCGDAYLREW PMTLNEIREF NPKAIAPGRG DALKGLETTR EAIAMTRDFV GTLYGAAEIS AAKGRSLKET WDATREKMDP KFSSFAIYEH CLPFNVSRAF DEASGIDDPV IWTAERDREM WAALQG
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