Gene RPD_1014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1014 
Symbol 
ID4021489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1153002 
End bp1153514 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content65% 
IMG OID637961205 
Productregulatory protein, MarR 
Protein accessionYP_568153 
Protein GI91975494 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.137304 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.145225 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCAAGC TCGATCTGTT TTCGTTCGTG CCGTTCCAGC TCAACCGGCT GGCCGCCGAG 
GTCAGCGCAG CGCTGGCCAG CGAGTATCAG CAGCGCTACG GGCTCGATAT TCCGGGCTGG
CGGATCTTGG CGACCCTCGG CTTCCGCAAC GACGCGTGCA CGGCACAATT CATTGCGCAG
TGCACCAGAA CCCACAAATC GACCATCAGC CGGGCCGTCA CCGCTTTGCT GCAGCGCGAA
CTGATCGAGC GGGTCGAGAA CGAGGACGAT CGCCGCGAAC TCCGCCTGCG GCTGACCCGC
AAGGGGCGCG CGCTCTATCA CGAGCTGGTG CCCCGGCTGA AACGCAGGGA ACAGCAGATC
CTGTCCTGCC TGTCCGCATC AGAGCGCGCC AATCTCGCGG AGGCGCTCGG CAAGATCGAG
CGGCACCTCA ATCTGATCCA GGCCGACCAC GATCAGGAGG CTCCGCATCG CGACGACCTG
CCGGCGGCAA AGCCACGGAT CTCGGTCGGC TGA
 
Protein sequence
MSKLDLFSFV PFQLNRLAAE VSAALASEYQ QRYGLDIPGW RILATLGFRN DACTAQFIAQ 
CTRTHKSTIS RAVTALLQRE LIERVENEDD RRELRLRLTR KGRALYHELV PRLKRREQQI
LSCLSASERA NLAEALGKIE RHLNLIQADH DQEAPHRDDL PAAKPRISVG