| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1011 |
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| Symbol | |
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| ID | 4021486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1147362 |
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| End bp | 1149518 |
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| Gene Length | 2157 bp |
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| Protein Length | 718 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637961202 |
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| Product | peptidase C14, caspase catalytic subunit p20 |
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| Protein accession | YP_568150 |
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| Protein GI | 91975491 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4249] Uncharacterized protein containing caspase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.114785 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGAGC GTCTCGGTCC GATTGGGGCG AAGATCGGCG CAGCCATCCT GGCGGTGGTG
ATGTCGTCCG GTCTCGCGTT CGCGGACGGC AAGCGCGTCG CGATGGTGGT CGGGAACTCG
ACCTATCAGA ACGTTCCGCA GCTACCCAAC CCGTCGCGCG ACGCGAACGC GGTCGCGCAG
ATGTTCAAGA GCGCCGGCTT TGATGTGACT TTGGTGGTCA ACGTCGGCAA TCTGGATTTC
AAGCGCGCGA TCCGCAAATT CGAGGCCGAC GCCGATCAGG CCGACATCGC CGTCATCTAT
TATGCAGGGC ACGGCATCGA GATCAGCGGC AGCAATTACC TGATCCCGGT CGATGCCCGG
CTCGCCAGCG ACCGCGACGC CGAGGACGAG GCGATCCCGC TCGATCGCAT GGTATCGTCG
GCCGACGGCG CGCAGCGGCT GCGCGTGGTG ATTCTCGACG CCTGCCGCGA CAACCCGTTC
ACAGTAAGGA TGCGCCGCGA GCGCAAAGTC GCGAACCGCG CTGTCAGCTC TGGCCTCGGC
AAGGTCGAGC CGACCAGTAC CGACACACTG ATCGCCTATG CGGCGAAGGC CGGCTCGACC
GCCGAAGACG GTCAAGGCGA GCATAGTCCT TTCACGTCCG CCATTCTCAA GAACCTCACC
GTGCCCGGAC TGGACATCCG GCTGGCGTTC GGCCGCGTCC GCGACGAGGT GATGAAGTCG
ACCGGCAACA AGCAGGAGCC GTTCGTGTAC GGCTCGCTCG GCGGCGGCAA TGTCTCGCTG
GTGGCGGCGC CGGCGGTGAC GCAGGAAGCG CACGCGAACG ACGTCAAGGC GGACTACGAC
CTGGTCGCCA AGATCGGCTC GCGCCGCGCC TGGGAAGTGT TCCTCAGCAC CTACAAGACC
GGCTTCTATG CCGATCTGGC CCGCGCCCAG ATCGCGAGCC TGACCGATCA GGCTCCTAAG
AGCGAGCCGT CGTCGGCCGC CGGCAACGTC AAGACAGCGG CGGTCGAGCC GAGCACGATG
GCGCCGGGGC GCGAGGCCAA CTCCAAGGAA GCGCTGGATT GGGACCGGGT AAAGGATAGC
AACGACATCT CGGCGTTGCA GAAATTCATC AAGCGCTATC CGGATTCGCC GCTGTCGATC
ACCGCGCAGA CCCGGGTCGA TCTGTTGCAG CGGATTGCGC GCGAGCGTGA CGACCGTGCG
CGCGCCGAGC GCGACGCCGC CGCAAAGGCC GCGGAACTGG CCAAGCAGCA GGCCGCCCAG
AAGAAAGTCG AGGAAGCCGC CGTGCGGAAG CGCGAGGACG ACGAACGCCG CGCGCAGAAG
GCCGAGGCCG ACGCCAAGGC CAAGGCGGAC GAAGCCGAAC GCAAGGCAGC CGAGGCAAAA
CGCAAGGCAG AGGATGCCGA CCGCCAGAAG ACCGCGGCGG AAGCCGCAGC GCTTCGCGCC
GAAAGCGAGC GGCGAACCAG GCTAGCCGAA GACGAGCGGC GCAAGGCGGC GGAAGCGACC
ATCCAGGAAA CCGTCTGCAA GGATCAGCAG GCCAAGTTCG ACGACCTCAA CGGCAAGAGC
AGCGCGACTT CCGCGCTCGA CGACATGAAG ACCTTCGCCA AATCGATTAC CTGCAGCCGG
CTGCAGCCGA TGGTCGCCAC GGCGATCGAT CGCCTCAAGC TGGAAGCGGA CAAGCGTGCC
GCGGCGATGC CTAATTCGCC GCAACTCGTC CGCTCGGCAC AAAGCGAACT GGCGCGGATC
GGATGCCTGA CCGAGAAGCC CAATGGCGAG CTCGGCGCCG CGACCAAATC TGCGTTGAGC
CGCTATTTGA GCATCAAGGG GCGCTCGTCG GACGACGCGA GCGTGACGGA GGATCTGGTA
TCCGACCTCG GCAAGCAATC CGGCCGCGTT TGCCCGATCG AGTGCAAATC GGGTCAGATC
GCCAAGGGTG ATAGCTGCAT CGCGAGCGAG AAGCCCGACG AGCCGAAAGC GGCAACCCGG
CGTCCGCGCG ACGACGATGC GGACGAGCCC GCGGCACGCC GCAAGCCGGC GCGCCGCGAA
GCACAGCAGG AGCGCCGCCC GTCCCGTCCC GAGCCGCGCG CGCGCCAGCA GGCATCGTCG
CGGCCGAGCG GCGGCGGTCA CGGTGGCGGC GCCGCGATGA TCGGTGTCGG CTTCTGA
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| Protein sequence | MFERLGPIGA KIGAAILAVV MSSGLAFADG KRVAMVVGNS TYQNVPQLPN PSRDANAVAQ
MFKSAGFDVT LVVNVGNLDF KRAIRKFEAD ADQADIAVIY YAGHGIEISG SNYLIPVDAR
LASDRDAEDE AIPLDRMVSS ADGAQRLRVV ILDACRDNPF TVRMRRERKV ANRAVSSGLG
KVEPTSTDTL IAYAAKAGST AEDGQGEHSP FTSAILKNLT VPGLDIRLAF GRVRDEVMKS
TGNKQEPFVY GSLGGGNVSL VAAPAVTQEA HANDVKADYD LVAKIGSRRA WEVFLSTYKT
GFYADLARAQ IASLTDQAPK SEPSSAAGNV KTAAVEPSTM APGREANSKE ALDWDRVKDS
NDISALQKFI KRYPDSPLSI TAQTRVDLLQ RIARERDDRA RAERDAAAKA AELAKQQAAQ
KKVEEAAVRK REDDERRAQK AEADAKAKAD EAERKAAEAK RKAEDADRQK TAAEAAALRA
ESERRTRLAE DERRKAAEAT IQETVCKDQQ AKFDDLNGKS SATSALDDMK TFAKSITCSR
LQPMVATAID RLKLEADKRA AAMPNSPQLV RSAQSELARI GCLTEKPNGE LGAATKSALS
RYLSIKGRSS DDASVTEDLV SDLGKQSGRV CPIECKSGQI AKGDSCIASE KPDEPKAATR
RPRDDDADEP AARRKPARRE AQQERRPSRP EPRARQQASS RPSGGGHGGG AAMIGVGF
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