| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1009 |
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| Symbol | |
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| ID | 4021484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1144956 |
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| End bp | 1146542 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637961200 |
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| Product | peptidase C14, caspase catalytic subunit p20 |
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| Protein accession | YP_568148 |
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| Protein GI | 91975489 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4249] Uncharacterized protein containing caspase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.781757 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.111483 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATCC GCATTGCGTT GTTCGTACTC CTCACTTTGC TGATGGCGCC GGCAACCCGA
TCGCAAGCCG ACGATCTGCG CGGCGGGCGC GTCGCGCTGG TGATCGGCAA CGCCAAATAT
CCCGACGCCG AGAAGCCTTT GACTCAACCG GTGAACGATG CGCGCGATCT GGCCGACGAG
TTGAAGCGCG ACGGCTTCGA CGTCGACGCC GGCGAGAACC TCAACGGAGA CGCGATGCGG
CGCGCCTTCG ATCGTCTGTA CAATCGTGTC AAGCCGGGAT CGGTGGCGTT GGTGTTCTTC
AGCGGCTTCG GCATCCAGTC CGGACGGCAG AGCTACATGA TTCCGGTCGA TGCCCAGATC
TGGACCGAGC CGGACGTCCG CCGCGACGGC ATCAGCCTCG AGACCGTGCT CGGGGAACTG
AACAGCCGCG GAGCAACCGT CAAGATCGCG TTGATCGACG CCTCGCGGCG CAATCCGTTC
GAGCGCCGGT TTCGTAGCTT CTCGGCGGGC CTCGCCCCGA TCATCGCACC CGGCGGCTCG
CTGGTGATGT ACTCCGCCGC GTTGAGTTCG GTGGTCAGTG ACAATGGCGG CGACCACAGC
CTGTTCGTCA GCGAACTGCT CAAGGAAATC CGCGTTCCCG GCCTCGGGGC CGAGGAAGCA
CTCAATCGCA CCCGGGTCGG CGTCACGCGG GCGTCGCGCA GCGAACAGGT GCCGTGGATT
TCGTCGTCGC TGGCGGAAGA CTTCTCCTTC GTGCCCAGTT CCAAGACCGC TGCGGCCGAT
ACCTCCAAGG CAAATCCCAT TGTCGATCGC ACGCCGCCCG AACCCGCGGC GAAATCCAAC
CCTGCTCCGG TCGAAACCAA GCCCGCCGTG GCGGTTAGTC CGCCCGTGGC GAAGCCTTCC
GCCACCGTCA CCAAGTCTGC TCCGGCGGCC GCCGCCGAAC CTGACAAGCC CGCTGAACTG
GCCAAGCAGA TCGAACTTCC GAAGCCGATC GATGTGCCGA AGGAGCTCGC CAAGGAACTC
GGCTCGATCA CAGCCGAACC GGTCTCCGGT GACGCCGGGC AGGACAACGA GAAGGTGAAG
CTGTCGCTGC GGGACGATCC GACCGTCCAG AGCCTGAGCA ATCGCATCGA GGAAAACCCG
GCCGACGCCA ATGCGCTGTA CCGGCGCGGT CAGGTCTACG CCAGCAAGGG CGCCTACTGG
TCAGCGATCA AGGATTTCGA CGACACGATC CGGCTCAACC CGAGGGATGT CGAGGCCTAC
AACAATCGCT GCTTCGTGCG CACCATCGTC AATGAACTGA CCGCAGCGCT CAAGGACTGC
AATGAAGCAC TGCGTTTGCG CCCCAATTTC GTCGATGCGC TCGACAGCCG GGGGCTGCTC
AATCTCAAGA ACGGCCAGAA CAAGAATGCG ATCGCGGATT TCGACGCGGC GCTGAAGATC
AATCCGCGGC TCACTTCGTC GCTGTACGGA CGGGGACTCG CCCGTCTGCG CTCCGGGATG
AAGTCCGAAG GGGAAATCGA CATCACAACC GCCAAGGGAT TGGACCCGAA TATCGTGAAG
GAGTTCGCTG GCTACGGGGT GCGCTGA
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| Protein sequence | MNIRIALFVL LTLLMAPATR SQADDLRGGR VALVIGNAKY PDAEKPLTQP VNDARDLADE
LKRDGFDVDA GENLNGDAMR RAFDRLYNRV KPGSVALVFF SGFGIQSGRQ SYMIPVDAQI
WTEPDVRRDG ISLETVLGEL NSRGATVKIA LIDASRRNPF ERRFRSFSAG LAPIIAPGGS
LVMYSAALSS VVSDNGGDHS LFVSELLKEI RVPGLGAEEA LNRTRVGVTR ASRSEQVPWI
SSSLAEDFSF VPSSKTAAAD TSKANPIVDR TPPEPAAKSN PAPVETKPAV AVSPPVAKPS
ATVTKSAPAA AAEPDKPAEL AKQIELPKPI DVPKELAKEL GSITAEPVSG DAGQDNEKVK
LSLRDDPTVQ SLSNRIEENP ADANALYRRG QVYASKGAYW SAIKDFDDTI RLNPRDVEAY
NNRCFVRTIV NELTAALKDC NEALRLRPNF VDALDSRGLL NLKNGQNKNA IADFDAALKI
NPRLTSSLYG RGLARLRSGM KSEGEIDITT AKGLDPNIVK EFAGYGVR
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