| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1004 |
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| Symbol | |
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| ID | 4021479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1136218 |
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| End bp | 1138167 |
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| Gene Length | 1950 bp |
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| Protein Length | 649 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637961195 |
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| Product | AsmA |
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| Protein accession | YP_568143 |
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| Protein GI | 91975484 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.478001 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.298922 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCCA CCAAGATCGC CGGCATCCTG ATTGCGGTGC TGATCGCCGC AGCGGCGCTG
CTGCTCACCA TTGGAATTCC GTCGGGCGCC GTGACCTCGG CGATCCAGTC GCGCGTCGAG
CGCGACACCG GCTACCGGAT CGCGATCGCC GGCGCGAGCA AAGTGAGCCT GTTTCCGGGC
TTCGCCGTCA CGCTGAACGA CGTCACGGTG CAGAACCCGA ACGATCGCAA TCCCGACAGC
CGTTTCACGA TCGGCAACGT CCGCGCCGAA CTGGCGCTCG GCAGCGTGAT CGCGGGCAAG
CCGCACGTCA CCGAACTGAC GCTGACAAAG CCGGAGCTTC GCGTCCCGCT GATCCGCGAC
CGCAACAATG CGCCGGCCGC CTCCTCATCC GCCGGCAGCG GCAAGACGAT CGACGCCGCG
ATCGATCGCA TCACGATCAA GGACGGCGTC GTCGTGATGG CGAATGCGGC CGATCGCGTC
GAGGACCGGA TCGATCGCAT CAACGCCGAG ATCACCATCG ATCCGGAGCG CCGCATCCAT
GCGATCGGCG GTGCGCAGCT CGCGGGCAAG CCGGCCAAAT TCGAGATCAA GGCGGCGCCG
CCGGCGGCGG ATGCGCAGCC TGTGCCGGTG GATTTCAAGC TCGACGCGCC CGACCTGCTG
AGCTGGCCGC TCGCCGCCAA GGCGGAGGTT CGGCTGCGCG GCGCGCTGCT GCAGATCAAC
GGCCTGTCCG GCACGCTCGG CGACGGCGCC TTCAACGGCT GGGCTTCGGC CGATCTCGCC
GGCAAGCCGC AACTCAAGCT CGACCTCGAT TTCCAGCGGC TCGACCTCGG CAACCCGCGC
AAGCCCACCG CGCCCGGCGC GCCCTGGAGC GATGCGCGAT TCGATCTGTC CGGGCTGAAC
TATGTCGACG CCGAGATCCG GTTGTCGGCG GCCGAGCTCA ACCTCGGCGC GGCGCATTTC
GCTCCCGCGT CGATCGACGC CAAGCTCGTG AGCGGCGCGG TCACCGCGCA GTTTGCGCAG
ATTGGCGTCT ATGGCGGCGA GGCGGAGGGG CAGCTCGGCA TCGACGCGTC GCAGCGCACG
CCGACGTTCA GCCTGCGCGG CGATCTCAAC GGCGTCCGGG CGCTGCCGCT ACTCAGCGGC
TTGGCCGAAT TCGACAAGAT CGACGGCAAG ATGCAGGCGA AGCTGGCGCT ACGCGCCAGC
GGCGACAGCG CACGCGCCAT CCTGTCGACG ATCGCCGGCA CCGCCTTCGT CAACGTCCGC
GACGGCGAAA TCCGCGGGCT CAACGTCGCG CGGATGATCC GCAATCTGAC CACCACGACG
CTGTCCGGCT GGCAGGAAAA CGGCGCCGAG GTCACCGACC TGACCCAGCT CGGCGCCTCG
TTCCGGATCG AGCAGGGCAA GGCCGCGACA GCCGATCTCG CGCTCGCCGG CCCGCTGGTG
CGGATGACCG GCGCGGGCAC GATCGATCTC GGCGCCAAGA CGCTGTCACT CAAGGTCGAG
CCGAAGCTGG TGCTGACCAC GCAGGGCCAG AGCGCGACGG GACAGGCGCC ACAGAACGGC
GCGGCCGCCG AGCCTGTCGG CCTCGGCATT CCGGTGGTGA TCGAGGGGCC ATGGGCGTCG
CCACGGATCT TCCCCGACGC CGCCGGCATC CTCGACAATC CCGACGCCGC CTATGCGCGG
CTGCGGGAGA TGGGCAAGGG CTTGTTCGGC GCGCTCGGCG GCGGCGGCGC GGCCGGCAGC
CCGGGCGCGG ACAACCCGCT CGGCGGGGCG CTCGGCGAGA GCATCGGCCG GCTGATCCAG
CAGGGCCTCC AGAGCGGCGC GGCCGCACCC TCCCGCGGCG CGCAGCCGGC CCAGCCGCCC
GCGCAGCAAC CCGGCGCGGC GCCCGCGCCC GACCGGCCGG ATAGCGACGC GGCCATGAAC
GCGATCATGA AGCAATTATT CGGCCGCTAG
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| Protein sequence | MKPTKIAGIL IAVLIAAAAL LLTIGIPSGA VTSAIQSRVE RDTGYRIAIA GASKVSLFPG
FAVTLNDVTV QNPNDRNPDS RFTIGNVRAE LALGSVIAGK PHVTELTLTK PELRVPLIRD
RNNAPAASSS AGSGKTIDAA IDRITIKDGV VVMANAADRV EDRIDRINAE ITIDPERRIH
AIGGAQLAGK PAKFEIKAAP PAADAQPVPV DFKLDAPDLL SWPLAAKAEV RLRGALLQIN
GLSGTLGDGA FNGWASADLA GKPQLKLDLD FQRLDLGNPR KPTAPGAPWS DARFDLSGLN
YVDAEIRLSA AELNLGAAHF APASIDAKLV SGAVTAQFAQ IGVYGGEAEG QLGIDASQRT
PTFSLRGDLN GVRALPLLSG LAEFDKIDGK MQAKLALRAS GDSARAILST IAGTAFVNVR
DGEIRGLNVA RMIRNLTTTT LSGWQENGAE VTDLTQLGAS FRIEQGKAAT ADLALAGPLV
RMTGAGTIDL GAKTLSLKVE PKLVLTTQGQ SATGQAPQNG AAAEPVGLGI PVVIEGPWAS
PRIFPDAAGI LDNPDAAYAR LREMGKGLFG ALGGGGAAGS PGADNPLGGA LGESIGRLIQ
QGLQSGAAAP SRGAQPAQPP AQQPGAAPAP DRPDSDAAMN AIMKQLFGR
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