| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0998 |
|---|
| Symbol | |
|---|
| ID | 4021473 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 1126892 |
|---|
| End bp | 1128952 |
|---|
| Gene Length | 2061 bp |
|---|
| Protein Length | 686 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637961189 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_568137 |
|---|
| Protein GI | 91975478 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.759416 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.641778 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGTCG GCGGCCGCGG CGGACACAGC GATGCGTTGG GGCGGCGACG CAGCGAAGAT
CGGGGATCTT CGTCATGGTC GGCACGGCCG GGCTTTCTCG CATTCTGGCG GACGCCGCAC
GCCTGCGCGG ACGGGGCAAG GCATCGCGTC CACGACGCTG CGACCGAGCT GGACTGTCTG
CGCGGGGTGC TTGCGCCGGC ACTGTTGCGG GCCGCCGAAT GCCGCGCGCG CGAACTGGAC
GTCGGGGCGG AGCGTGTCCT GATCCAGTGG GGGATGATCG ACGAGGAGGC CTACCTTCGC
CGCCTCGCTT TTCATCTCGA TCTTCCGCTG GCTGATCTGT CGACCGCCGA CCGCGCCGAC
TGCCCATCTT CGGATCGCCA GATTGCGGCC GCGGCGGAAA CCGGACTCAT TCCATTGCGG
CAGGACGGCG AACTGGTCTG GGTGCTGGCG CCGACGATCC GGCACACGGC GCGAACGCTG
TGCCGGGTGC TCGACCGGCT TCCGGACCTG CGCGGGCGGC TGCGGCTGAC CTCGGCCGCT
TCGCTGCAGC GATTTCTGAT GCAGCAGGGC CGCGACGCGA TCGCCGACGC AGCGACCGGC
GATCTGCAGC AGCGATTTGC GGCGATGTCG GCGGCGCCGG GGCACGCCGC GGGTCCGGTA
TGGCGGCAGC GGCTGCGCCG CTTCGCAGGC CTGCTCGGAT TGGCGATGCC GGCGATGATC
GCGCCCGGTC TCGTCGCGAA CCTGCTGGCG GTGTGGTTCA TGGGGTTCGC GACGCTGCGA
CTGGCGGCGT GCTTCTGGCC GCGCGCGGCG CAGCGGCCGC TGCGGCGGCG GCCCGACGCG
ACGCTGCCGA TCTATACCGT GGTGGCGGCG CTGCATCGGG AGGAACGCTC GGTCGCAGGG
CTGGTCGCGG CGATCGAGGC GCTGGACTAT CCGCGCGAGA AGCTCGATGT CATCCTCGTC
ATCGAACCCA ACGATCTCGC CACCCGCGCG GCGATCGCCC GGCTCGGACC GCGGCCCCAT
CTGCGTGTCC TGATCGCGCC ACCGGTCGCG CCCCAGACCA AACCGAAGGC GCTGAACTGC
GCGCTGGCGT TCGCGCGCGG CAGCTTCATC GCGGTGTACG ACGCCGAGGA TCAGCCGGAG
CCCGGCCAGT TACGCGCCGC GCTCGACGCC TTCGACCGCC ACGGCGCGAC CACCGCCTGC
GCGCAGGCCA GCCTGTGCAT CGACAACATC ACTCATAGCT GGCTGTCGCG CACCTTCGCC
GCCGAATATG CCGGGCAGTT CGACCGGTTG CTGCCCGGCC TGTCCGAAAT GAACCTGCCG
CTGCCGCTCG GCGGCACCTC GAACCACTTC CGCACCGACG TGCTGCGCGC GATCGGCGGC
TGGGACCCCT ACAACGTCAC CGAGGACGCC GATCTCGGCT TCCGGCTGGC GCGGTTCGGC
TACCGCTCGG TCAGCTTCGC GTCGACCACC TATGAGGAAG CACCGATTAC TTTCGACAAT
TGGCGGCGGC AGCGCGCGCG CTGGATGAAG GGCTTCATCC AGACCTGGCT GGTGCATATG
CGCCATCCGC TGCGGTTGTG GCGCGACATC GGCCCGCGCG GCGTGCTCGC GCTGAATCTG
ATCGTCGGCG GCAATCTGCT GACCGCGCTC GTCCACCCGC TGTTCCTGGG CATCGCCCTC
GCCTCGCTCG CAGGCGCATG GCTCGAGTTG CCGGCCGTGC TGCAGCCGTC GCCGCCATCG
CCGCTGCATT GGCTGGCGAT CGCGGCCGGC TACGCCTCGA CCGTCGTGGT CGGCCTGCGC
GGCCTGGCCG GACGCCGGCA ATTGCGGCTG GGCTTCGTCC TGCTGCTGAC GCCGGCCTAT
TGGATCTGCC TGTCGATCGC GGCCTGGTGC GCGGTGGCGC AGTTTGTCTG GCGGCCTTAT
TACTGGGAGA AGACCGTCCA CGGCGTCGCA AAGCGAGCCA AGGCGCCGTT GCCGGGGGTC
GCGGCCGGGC CGGCGATACG CCGAGCTACA AATAGCGTTT CAGATCCGCG GCGGCTTCTT
CGGGCTTCCG CTTCATGTTG A
|
|---|
| Protein sequence | MAVGGRGGHS DALGRRRSED RGSSSWSARP GFLAFWRTPH ACADGARHRV HDAATELDCL
RGVLAPALLR AAECRARELD VGAERVLIQW GMIDEEAYLR RLAFHLDLPL ADLSTADRAD
CPSSDRQIAA AAETGLIPLR QDGELVWVLA PTIRHTARTL CRVLDRLPDL RGRLRLTSAA
SLQRFLMQQG RDAIADAATG DLQQRFAAMS AAPGHAAGPV WRQRLRRFAG LLGLAMPAMI
APGLVANLLA VWFMGFATLR LAACFWPRAA QRPLRRRPDA TLPIYTVVAA LHREERSVAG
LVAAIEALDY PREKLDVILV IEPNDLATRA AIARLGPRPH LRVLIAPPVA PQTKPKALNC
ALAFARGSFI AVYDAEDQPE PGQLRAALDA FDRHGATTAC AQASLCIDNI THSWLSRTFA
AEYAGQFDRL LPGLSEMNLP LPLGGTSNHF RTDVLRAIGG WDPYNVTEDA DLGFRLARFG
YRSVSFASTT YEEAPITFDN WRRQRARWMK GFIQTWLVHM RHPLRLWRDI GPRGVLALNL
IVGGNLLTAL VHPLFLGIAL ASLAGAWLEL PAVLQPSPPS PLHWLAIAAG YASTVVVGLR
GLAGRRQLRL GFVLLLTPAY WICLSIAAWC AVAQFVWRPY YWEKTVHGVA KRAKAPLPGV
AAGPAIRRAT NSVSDPRRLL RASASC
|
|---|
| |