Gene RPD_0991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0991 
Symbol 
ID4021466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1118359 
End bp1119522 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content67% 
IMG OID637961182 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_568130 
Protein GI91975471 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0239278 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCAGC CGCCGCTGTT CCGCCCGATC ACCTTGCGCG GCATCACCGC CAGGAACCGC 
GTCCTGATCT CGCCGATGTG CCAGTATTCG GCGGTCGATG GCGTGGTCAA CGACTGGCAC
CTCGTCCATC TCGGCAAGTT CGCGCAGGGC GGCGCCGGCA TCGTGATGGT GGAAGCGACC
GCGGTAACCG CGAACGGCCG CATCACCCAT GGCGACGTTG GGCTCTGGCA CGACGGCCAG
GTCAAGCCGC TGGAGCGGAT CGCCGCCTTC CTGCGCGACA ATGGCGCGGT GCCGGCGATC
CAGCTCGCCC ATGCCGGCCG CAAGGCCAGT ATGCAGCGGC CGTGGTACGG CAACGCTGCG
CTCACTCCGG AGGATCAGAC GCGTGGCGAT CTGCCTTGGC CGATCGTCGC CCCGAGCCCG
ATTCCGATGG AGGAAGGCTG GCTGACTCCG CAGGAATTGT CGGAAGACGA ATTTGGCGAA
TTGCTCGATG CGTGGCGAGC CGCGACGCTG CGCGCGGTCG AGGCCGGGTT CGAGATGCTC
GAGGTGCATT GCGCCCACGG CTATCTGCTG CACTCGTTCC TGTCGCCCTT GTCCAACAAA
CGAACCGACG CTTACGGCGG CAATCGCACC GGTCGGATGC GGTTTCCGCT GCAGGTGATC
GAGACCGTCC GTGCGGTCTG GCCCGACACG CTGCCGTTGG CGGTGCGGAT ATCGTCGGTC
GACGGCGTCG ACGGCGGCAT CGAACTCGCC GACTCGGTGG TGTTCGCGCG GGAAGCCAAG
GCGCGCGGCG TCGATCTGAT CGATTGTTCG TCGGGCGGGC TGCTCGGCTC CGCCACCGCG
GCGGGGATCC CGCGCGGCTA CGGCTTCCAG GTTCCGTTCG CCGAGACCAT TCGCAAGGAG
GCCGAGATTC CGACCATCGC GGTCGGCCTG ATCCTGCATC CGGACCAGGC GGAGTCGATC
GTCGAGCGGG GCCAGGCCGA TCTGGTCGCG ATCGGCCGCG AGGCGTTGTT CGATCCGAAC
TGGACGCTGC ACGCCCAGCT CGAACTCACC GAAGAGAAGG AGACGTTCGC CGACTGGCCT
AAGCAATATG GCTGGTGGCT GGAGCGCCGC GAATCCGGCC TGCGCAAGCT CGAAGGCTGG
AAACTGCCGT TCCGGCGGAA TTGA
 
Protein sequence
MSQPPLFRPI TLRGITARNR VLISPMCQYS AVDGVVNDWH LVHLGKFAQG GAGIVMVEAT 
AVTANGRITH GDVGLWHDGQ VKPLERIAAF LRDNGAVPAI QLAHAGRKAS MQRPWYGNAA
LTPEDQTRGD LPWPIVAPSP IPMEEGWLTP QELSEDEFGE LLDAWRAATL RAVEAGFEML
EVHCAHGYLL HSFLSPLSNK RTDAYGGNRT GRMRFPLQVI ETVRAVWPDT LPLAVRISSV
DGVDGGIELA DSVVFAREAK ARGVDLIDCS SGGLLGSATA AGIPRGYGFQ VPFAETIRKE
AEIPTIAVGL ILHPDQAESI VERGQADLVA IGREALFDPN WTLHAQLELT EEKETFADWP
KQYGWWLERR ESGLRKLEGW KLPFRRN