| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0971 |
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| Symbol | |
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| ID | 4021446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1102365 |
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| End bp | 1102943 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637961162 |
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| Product | sigma-70 region 2 |
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| Protein accession | YP_568110 |
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| Protein GI | 91975451 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.259362 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGGAC AAGGGACCGT GGCGACCGGC GTGCGCAATC CGGCTGTCGT CGATGACGGA
CGCGAGCAGC AATTGGGCGC GGCCCTGGCG CGATGCGCGC GCGGCGATCG CGCCGCGCTG
CAGCTGATCT ATGACGCCGA AGCGCCGAGG ATGATCGGCG TCGCGCGCCG CATTTTGTTC
CGTCAGGATC TTGCCGAGGA GGCGGTCCAC GACGCCTTCA TCCGGATCTG GCGCGGCGCG
GCCGGCTTCG ATCCGCAACG CGGCAGCGCC AGCGGCTGGC TCTACGCCGT GGTGCGCAAC
CGCGCGCTGA GCATTCATCG CGATGAACAT CGCTACGCCG CCGCCGACGA GACCGCGCTT
GATCCGGACG CCGAGGCGCC GCTCTTGCGG ATGCCGGAGC AGAGCGCGTT GCGCCGTTGT
CTCGAGCGGA TCGAGCGACC GCGGCGCGAC GTCGTGATCC TGGCCTATGC GCACGGCATG
AGCCACGGCG AACTGGCCGG GCGGTTGAAG GTTCCGCTCG GCACGGTGAA AAGCTGGGTC
CGGCGCAGTC TGTTCGCGTT GCAGGAGTGC ATGGGATGA
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| Protein sequence | MTGQGTVATG VRNPAVVDDG REQQLGAALA RCARGDRAAL QLIYDAEAPR MIGVARRILF
RQDLAEEAVH DAFIRIWRGA AGFDPQRGSA SGWLYAVVRN RALSIHRDEH RYAAADETAL
DPDAEAPLLR MPEQSALRRC LERIERPRRD VVILAYAHGM SHGELAGRLK VPLGTVKSWV
RRSLFALQEC MG
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