Gene RPD_0960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0960 
Symbol 
ID4021435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1087300 
End bp1087869 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content66% 
IMG OID637961151 
Producthypothetical protein 
Protein accessionYP_568099 
Protein GI91975440 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTTG ACTCCCAATG TGAAGTGGCC GCGCTGGTCT ATGACCGCGG CGATGATCCG 
GACGGCGTCC TGCAGGCGTT CGCGGCCGAT CTCAATGCAA GGGGTTACCG CTCGGTCGGG
CTGGTGCAAT TCGGGCATCG GCAGGCCGAC GCGCCGCGCT TGTCGGCGAG GCTGGTCCAC
AACGGCGAGG AACTGCCGCT GTATCAGGAC CTCGGCTTGC AGGCGACCGG TTGCGCGCTC
GATCCCGGCC GCTTGCTCGA CGCTGGCGCG CGCGTGGCCA GCGCCATGGA GCAGGGCGCG
GATCTTCTGA TCATCAATCG CTTCGGCCAG CACGAGAGCG AGGGTCAGGG GTTGTTGCAT
CTGATCGTCC AGGCGCTGAG CGCAGATATT CCGCTGGTGA TTGCGGTGCC GAGCCATCGC
TTCGACGCCT GGATCAGATT CGCCGACGGC ATGAGCGTAC GGCTGCGCTG CGATCGGCAG
GTATTGGATG CGTGGTGGTC GACGCTGCAC GGCCGCGTCG GGCGCCGCGC GGCCCGCGCT
CACACGACGA TGTGCGAAGT CTACAAATAG
 
Protein sequence
MTFDSQCEVA ALVYDRGDDP DGVLQAFAAD LNARGYRSVG LVQFGHRQAD APRLSARLVH 
NGEELPLYQD LGLQATGCAL DPGRLLDAGA RVASAMEQGA DLLIINRFGQ HESEGQGLLH
LIVQALSADI PLVIAVPSHR FDAWIRFADG MSVRLRCDRQ VLDAWWSTLH GRVGRRAARA
HTTMCEVYK