| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0959 |
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| Symbol | |
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| ID | 4021434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1081847 |
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| End bp | 1086856 |
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| Gene Length | 5010 bp |
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| Protein Length | 1669 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637961150 |
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| Product | pyruvate flavodoxin/ferredoxin oxidoreductase-like |
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| Protein accession | YP_568098 |
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| Protein GI | 91975439 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATGG AACGACCCAT GAACGCAAAA TATCCCGGCA TTCCCTCTGT CATTCACGGC
AACGGCGCGG TCGCGCAGGT GATGGGTCAT GTCTGCGGCG GCGTCATCGG CTACCCGATC
ACGCCCTCGA CCGAGATCTC CGAAATCTAC GAGGCGTTCC GCTCCTCCGG CGGCTGCAAT
GTCTGGGGCA AGCATCCGTT CTTCTTCGAG CCCGAGGGCG AGCACTCAGC GCAGTCCGGC
GCGCTCGGCG CGGCGCTGAC CGGCGGCAAG TTCATCTCCA ACGCTTCGTC GAGCCAGGGC
ATTCTGTATG GCCTCGAGTC GCACTACGTC ACCGTCGGCA AGAAGGTCGG CGGCTTCGTG
CTGCAGGTCG CCGCGCGCGT GGTGTCGAAG CATTCGCTGA ACGTGATGGC CGGCCATGAT
GACGTCTATG CGCTGCTGTC GTCGGGCTAC ACCATCCTGT TCGGCTCCAA TCCGCAGGAG
GCGGCCGACC TCGCCGCGAT CTCCTATAAA GTCGCAGCGA CCTCGCTGAT TCCGGTCGCG
AACGCGATGG ACGGCTTCGC CACCTCGCAC ATGCTCAGCG AAGCGCTGAT GCCCGAACCC
GAACTGCTGC GCGACTTCCT CGGCGACCCG GCCGGCCGCA TCAAGTGCCC GACGGTGGCG
CAGGAGATGC TGTTCGGCGC CAAGGGCCGC GTGTTCCAGC TCAAGCAATA TCTGGCGCGG
CACGATGCCG ACTTCGTGCC GGCCGACCTC GCGGCGCTGA AGGCGCATCT CGACGCCAAT
GCCGACGCGA TCGAAACCGA CGGCGACGCC CGGCTGATCG ACGCGACGCT GCAATTCGTG
CCGGAAGAAC TCCGCGCGCA ATGGAAGCGG CAGTGGATCA ACGCGCCAGA GAAGGGCACA
AGGCAGCTGG TGCCGGCGCT GGTCGACATC GACAATCCGG GCCTCACCGG CGGCGTGCAG
AACCAGCCGG ACTTCCAGGC CGGCGCGGTC GACCACCGCA CCCACTTCGT CAACGCGGTG
CCGCGCTTCG TCAGGGAGGC GATGGATGAA TACGCCAGCC TGACCGGCCG CGAATACAAG
CCGGTGATGA CCTATATGTG CGACGACGCC GAGACCGTGA TGGTCGGCCT CGGTTCGGTC
ACCGACGACG CCGAGGCGGT CGCGGCTTAC TTGCGCTCGC AGGGCAAGAA GGTCGGCGTG
ATCTCGGTCA AGATGCTGCA GCCGTTCCCG GAGGCCGAAC TGGTCGCCGC GCTGAAGGGC
AAGAAGGCGG TCACCATCCT CGAGCGTTCG GACGTCACCG CGCTCACCAG CCTGGTGACG
CAGGCGCTGT GCAAGGCGCG CGAGAACGGC GACGCCGGCG TGCGTCATGC CGGCATCCCG
GCGCTCGACA AGCTGCCGAA GATCACCACC GCGATCTTCG GCCTCGGCGG CCACGATCTG
CAGCCGCGCG ACCTGATCGC CTGCTACGCC AATATGGAGA AGCCGGATTC GGCGCCGTTC
GTCTATCTCG GCACCAGGTT CTTCACCGAG AACGCCTCGC CGCGCATGGC GGCGCTGCAG
AACCGGTTGA AGGCGGCCTA TCCGGAAACG GAATTCATGG CGCTGCAGAC CGGCACCAAC
CCGAACCTGC TGCCGCCGTC GGCGTTCCGC ATCCGCTTCC ACTCGATCGG CGGCTACGGC
ACCATCGCCT CCGGCAAGCT CTTGACCGAC ATCCTCGCCG GCGCGCTCGA CATGCACTCG
AAGTCGGCGC CGAAATACGG CTCGGAAAAG AGCGGCGCAC CGACCAACTA TTATATCACG
CTGTCGCCGG AGCCGGTGAA GATCACCAAC GCCGAGCTGG AAGACGTCGA GATCGTGATC
TCGCCGGACC ACAAGGTGTT CGTGCACACC AACCCGCTGC GCGGCCTGAT CGAAGGCGGC
ACCTTCATCC TGCAGACCAA TTTGTCACCG CTGGAAGTGT GGCGTGATCT GCCGGCCAAG
GCCCGCGCCA CCATCCGCGA CAAGAAGATC AAGTTCTATC TGATCGACGC CTTCGCGGTG
GCCAAGCGCC ACGCGCCGAC CGCCGAACTC GAAACCCGGA TGATGGGCAT CGCCTTCATC
GGCGCGGTGT GCGGCAATGT CGACCGCGTG GTGGCCGACG CCTCGCAGGA CGCGATGCTG
AACAAGATCC GCCAGCAGAT CGCCAAGAAG TTCGGCGCCA AGGGCGGCGA CATCGTCGAA
GGCAATATGG CGGTGATCCG CGAGGGTCTG GAGGCGACCA ACAAGATCGA CTACGACGCG
CCGGAATTCA GCGAGGACGC CATCAAGGCC GCGCCGAAGA AGAAGGCCGA CGCCTCGATC
TCGGCCTCGA TGTGCCGCGC CGCCTCGCCG GCTTCGGCGT CGGGCTTCCT CGATCCGCAG
TATTACGACG ACGTGCTCGC CGGCCCGTTC CGCGACGGCA CCATTGCGGA CGCGCCGGTG
CTGCCCGGCA TCGGCATGTT CATGCCGGCC GGCTCCGCCG CCGCGAAGGA CAAGGGCCTG
TTCCGCCGCA ACGTGCCGGA GTTCAAGGCC GATCTCTGCA CCGGCTGCAT GGAATGCGCG
CTGGTCTGCC CGGACGCCGC GATCCCCAAC GCCGTGCACG ATATCCATGA ACTGCTCGGC
ACCGCGATCC AGCAACTCGA CATCGCGCCC GCGCAGCAGG AAGCGCTGCG CGGCCAGGTG
CCGAGCCTGA GTGAGGCGAT CCGTGAGGTC TATCGCAGCG GCAAGGACGA CAAGCCGTTC
CACGAGGTCG TGACGCAGGC GGCCGACGCG CTCGACGTCG GCAACGCCAC GCTGAAGCGC
AATTTCGGCA AGCTGTCGGC GGCGCTGTCG GTGTATCCGG TGTCGCGGAC GCGGCCGTTC
TTCGATGCGA TGGAAAAGAG CCAGCCGGGC ACCGGCGGTC TGTATTCGGT CAGCGTCGAC
CCGTGGAAGT GCTCGGGCTG TCTCGAATGC ATCGACGTCT GCGGCCCCGG CGCGCTGGTC
GATCGCGAGC AGGACGAACC GTTGCTGGAG CAGTTGCAGG CCCGGTTCGA ATTCCTCAGC
CGCACGCCGA ACACCCCGGC CCGGTTCACT GAAAGCGCGA CCAAGCCGGA CGGCGAAACC
AAGCGGCTGA TGCTCGACCG CGCCAATTAC TACGCGACCA CCGGCGGCCA CGGCGCCTGC
CGCGGCTGCG GCGAAGTCAC AGCGATCCGT CTGGTCACCT CGACCAACCA CGCGATCCAC
GACAAGCGCC GCAAGGAGCA CACCCGCGAA CTGGAAGGTC TCATCGATCA ACTGACCGCC
AAGCGGGCGC AGGTCGCCTC CGACCCGGCC CGCGCCGCGC GGATCGACGC GACGCTGAAG
ACGCTGGAAA AGCGGCTGTA TCTCTATGAG AGCGGCCCGA CCGGCAACGG CCCGTCCGGC
ATGGTGATCG CCAACGCCAC CGGCTGTTCG AGCGTCTACG CTTCGACGTT CCCGTTCAAC
CCCTACACCG ATCCGTGGGT GAACAGCCTG TTCCAGGACA CCCCGGCGGT CGCGAAAGGC
ATCTTCGAAG GCCTCACCGC GCAGGCCTCC GACGATTTCC GCGCGCTGCG TGTCGCCAGG
CTGGAATTGG CGGACGCTTA CGATCCGGCC AAGCACGACG GTTACTTCCG CTACTTCGGA
TGGGGCCAGT TCACGCCCGA CGAACGCAGC CTGCTGCCGA CCGTGCTGAG CATGGGCGGC
GACGGCGCCA CCTACGACAT CGGCTTCGGC GCGCTGTCGC GGCTGTTGTC GACCAAGACC
CCGATCAAGG TCGTGGTGCT GAACACCGGC GCCTATTCGA ACACAGGCGG TCAGACGTCG
ACCGCCAGCC TCACCGGCCA GGACTCCGAC CTGTCGCGGT TCGGTATCGC CAATCACGGC
AAGCAGGAAT CCCGCAAGGA GCTCGGCCTG ATCGCCTCGT TCCATCCCAA CGTGTTCGTG
GTGCAGACCG CGACCGCGCT GCAGGGGCAC TTCCTGAAGA ACGTGATGGA GTTCCTCAAC
CACACCTCGT CGCCGGCGGT ACTCGACGTC TACACCCCCT GCCAGGCCGA GCACGGCATC
GGCGACGCGG TCGCCAACCG TCAGGCCCGC AAGGCGGTGG AGAGCCGGAT GAATCCGGTG
TTCGTCCACG ATCCGCGCAA GGGCAACAAG CTCGACAACT GGTTCTCGCT CGACGGCAAC
CCCGAGCCCG ACCAGGATTG GGCGTCGCAG TCGATCGAAT ATGTCGACGA CAACGGCGCG
ACCCAATTGC TCAAGGCCAA GGTGACGCCG GCCGATTTCG CCTACAGCGA AGTCCGCTTC
CGCAAGCAGT TCAAGCCGCT GAAGAAGGAC GCCGACGGCC TCCCGGTCGA TGAATACGTC
GCGCTGGACG CGGACGCCCG CACCGGCAAG ACGCCGTTCA TCTACGGCAC CGACGGCGAC
AAGAAGCTGG TCAAGCTCGC GGTCGGCGAG TCGGTGATCG CGCTGGTCGA GGAGCGGCGC
AAATACTGGC GCACGCTGCA ATATCTCGGC GGCTTCGACG TCCGCGCGCT GGACGAAAGC
CACCGCGTCG AACTCGAGGC GCTGCAGCAC CAGTACGAGG AATCGGTCAA GTCGCGGGAG
ACCTCGCTCG ACGCCATCGC GCGCGGCATG AGCGAACTCG CGGCAAGCTC GAACGCGCCG
GCCGCGAACG GCTTCGCCGG GCTGATGGCC GGACTTGCGC CGTCCCCGGC CGCCGCGGCG
CAGACCAACG GCTCGAAGCC GGCCAACGGC GCCAATGGCG GCGCGCATAT CGACATCGCC
GAGACCGACC TCGACAAGTG CACCAACTGC AAGAGCTGCT ATCAGGACGT GCCTGAAGTG
TTCGAACTCA CCAAGATTGT CGTCGGCGGC GCCTCCAAGG ACGTCGCCCA TGTGATCCCG
GGCGTGTTCG GCAAGCTCAA GGTGACGCCC GAATTGTCGG CGAAGCTGAA CCGTGCGGCG
GCGAATTGCG ACGCGGAGAT CATCCGATGA
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| Protein sequence | MEMERPMNAK YPGIPSVIHG NGAVAQVMGH VCGGVIGYPI TPSTEISEIY EAFRSSGGCN
VWGKHPFFFE PEGEHSAQSG ALGAALTGGK FISNASSSQG ILYGLESHYV TVGKKVGGFV
LQVAARVVSK HSLNVMAGHD DVYALLSSGY TILFGSNPQE AADLAAISYK VAATSLIPVA
NAMDGFATSH MLSEALMPEP ELLRDFLGDP AGRIKCPTVA QEMLFGAKGR VFQLKQYLAR
HDADFVPADL AALKAHLDAN ADAIETDGDA RLIDATLQFV PEELRAQWKR QWINAPEKGT
RQLVPALVDI DNPGLTGGVQ NQPDFQAGAV DHRTHFVNAV PRFVREAMDE YASLTGREYK
PVMTYMCDDA ETVMVGLGSV TDDAEAVAAY LRSQGKKVGV ISVKMLQPFP EAELVAALKG
KKAVTILERS DVTALTSLVT QALCKARENG DAGVRHAGIP ALDKLPKITT AIFGLGGHDL
QPRDLIACYA NMEKPDSAPF VYLGTRFFTE NASPRMAALQ NRLKAAYPET EFMALQTGTN
PNLLPPSAFR IRFHSIGGYG TIASGKLLTD ILAGALDMHS KSAPKYGSEK SGAPTNYYIT
LSPEPVKITN AELEDVEIVI SPDHKVFVHT NPLRGLIEGG TFILQTNLSP LEVWRDLPAK
ARATIRDKKI KFYLIDAFAV AKRHAPTAEL ETRMMGIAFI GAVCGNVDRV VADASQDAML
NKIRQQIAKK FGAKGGDIVE GNMAVIREGL EATNKIDYDA PEFSEDAIKA APKKKADASI
SASMCRAASP ASASGFLDPQ YYDDVLAGPF RDGTIADAPV LPGIGMFMPA GSAAAKDKGL
FRRNVPEFKA DLCTGCMECA LVCPDAAIPN AVHDIHELLG TAIQQLDIAP AQQEALRGQV
PSLSEAIREV YRSGKDDKPF HEVVTQAADA LDVGNATLKR NFGKLSAALS VYPVSRTRPF
FDAMEKSQPG TGGLYSVSVD PWKCSGCLEC IDVCGPGALV DREQDEPLLE QLQARFEFLS
RTPNTPARFT ESATKPDGET KRLMLDRANY YATTGGHGAC RGCGEVTAIR LVTSTNHAIH
DKRRKEHTRE LEGLIDQLTA KRAQVASDPA RAARIDATLK TLEKRLYLYE SGPTGNGPSG
MVIANATGCS SVYASTFPFN PYTDPWVNSL FQDTPAVAKG IFEGLTAQAS DDFRALRVAR
LELADAYDPA KHDGYFRYFG WGQFTPDERS LLPTVLSMGG DGATYDIGFG ALSRLLSTKT
PIKVVVLNTG AYSNTGGQTS TASLTGQDSD LSRFGIANHG KQESRKELGL IASFHPNVFV
VQTATALQGH FLKNVMEFLN HTSSPAVLDV YTPCQAEHGI GDAVANRQAR KAVESRMNPV
FVHDPRKGNK LDNWFSLDGN PEPDQDWASQ SIEYVDDNGA TQLLKAKVTP ADFAYSEVRF
RKQFKPLKKD ADGLPVDEYV ALDADARTGK TPFIYGTDGD KKLVKLAVGE SVIALVEERR
KYWRTLQYLG GFDVRALDES HRVELEALQH QYEESVKSRE TSLDAIARGM SELAASSNAP
AANGFAGLMA GLAPSPAAAA QTNGSKPANG ANGGAHIDIA ETDLDKCTNC KSCYQDVPEV
FELTKIVVGG ASKDVAHVIP GVFGKLKVTP ELSAKLNRAA ANCDAEIIR
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