Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0958 |
Symbol | |
ID | 4021433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 1079016 |
End bp | 1081850 |
Gene Length | 2835 bp |
Protein Length | 944 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637961149 |
Product | putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase |
Protein accession | YP_568097 |
Protein GI | 91975438 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases [COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGCG TCACCGGCAC GATCCCCAAC GAGGTGCTGC GCTACGAACA GGCGCGCAGC ACACTCGAAA CATCGCGTAA CGAGCTGGAA GAGCTGCAGC ACAGCGAGGC TGTCGGCGTC TTCCAGAAGC AGATTGCGCT GTTGCAGAAG CGGCTGCTGA ACGACCCGGC GTCGCTGCGC AACATGTTCA TCTCCGACGG CACCCAGGCG ATCGTCTGGG AGTTCCAGCA AAGCGAACTC GGCGCAGCTT TCACCACGAT GCTGTGGGAG CTGCTCAAGC GCGACGACGA CATGAGCGCG ATCCTGCAGC GCTTCATCTG GGCGCTGCCG CTCAAGTTCA AGCGCAAGTT CATCAAGGCG ATCGACGTGC ATCTGCGCGA ACGCTATCCG ATGTTCGAAA ACCTGTCGGA AGGCTGGCCG GGCGAGACAT TCATCCCGCC TTACATCCGC CCGGCTGAAG AGCGGGCGGT CGACTTCGAC CTCGTCAACC AGGGCTATCT CGGTTACCAG TCGATCGGCT ACTCGTTGCG TGAATGCGAG CTGTTCGTCT GGCTGGAAGT GCTGCGCGAC AAGCAGTGCG ACGACAAGCC GTGCGAGATC GGCATCCTGG TCCACGGCAA GAGCGAGCCG AAGGGCGGCT GCCCGGTGAA GATCCACATC CCCGAGATGC TGGACCTGCT CGGCACCGGC CGGCATCGCG AAGCGCTGGA GCTGATCGAG AGCTGCAACC CGCTGCCGAA CGTCACCGGC CGCGTCTGCC CGCAGGAACT GCAGTGCCAG GGCGTCTGCA CCCATACCAA GCGCCCGATC GAGATCGGCC AGCTCGAATG GTATCTGCCC GAGCACGAGA AACTGGTGAA CCCCAACGCC AATGACCGCT TCCTCGGTCG GGTCTCGCCA TGGGCGGCGG CCGCGAAACC GCCGATCGCG GTGGTCGGCT CCGGCCCGTC GGGCCTGATC AACGCCTATC TGCTGGCGGT CGAAGGCTTC CCCGTCACGA TCTTCGAGGC GTTCCACGAT CTCGGCGGCG TGCTGCGTTA TGGCATTCCG GAATTCCGGC TGCCCAACAC GCTGATCGAC GACGTGGTCG AGAAGATCAC GCTGCTCGGC GGTCGCTTCG TGAAGAATTT CGTGGTCGGC AAGACCGCGA CGCTGGAAGA CCTCAAGGCC GAGGGCTTCT GGAAGATCTT CGTCGGCACC GGCGCCGGGC TTCCGACCTT CATGAACGTG CCGGGCGAGC ATCTGCTCGG CGTGATGTCG GCTAACGAGT TCCTGACCCG CGTCAATCTG ATGCGCGGCC TGGACGATCG CTACGAGACG CCATTGCCTG AAACCAAAGG CAAGAACGTG TTCGTGATCG GCGGCGGCAA CACCGCGATG GACGCGGCGC GCACCGCCAA GCGACTCGGC GGCAACGTCA CCATCGTGTA TCGCCGCACC CAGAGCGAAA TGCCGGCGCG CGTCGAGGAG CTGCATCACG CGCTCGAAGA AGGCATCAAT CTCGCGGTGC TGCGGGCGCC GCGTGAGTTC ATCGGCGACG ACCACACCCA CTTCGTCACC CACGCGCTGC TCGACGTCAA CGAACTCGGC GAACCGGACA AGTCCGGCCG CCGCAGCCCG AAGCCGACCG GCGAGATCGA ACGCGTGCCG GTCGACCTGG TGATCATGGC GCTGGGCAAC ACCGCCAACC CGATCATGAA GGACGCCGAG CCCGGCCTGA AGACCAACAA ATGGGGCACC ATCGAGGTCG AGCAGGGTTC GCAGCGCACC TCGATCAAGG ACGTCTACTC GGGCGGCGAC GCCGCGCGTG GCGGCTCCAC CGCGATCCGT GCGGCCGGCG ACGGCCAGGC CGCGGCCAAG GAAATCGTCG GCGAGATCCC GTTCACCCCG GCTGAGATCA AGACCCGCGT CGAACGTGCG GCGCGCTATA CCGAGCTCGG CCAGATCGCG CAGACCATCG TCAACAAGGT GCCGCTGGCC GGCGGCATCG TCGAGTTCAC GGTGCGCGCC CCGATGGTGG CGCGTTCGGC GCAGGCCGGA CAATTCGTCC GCGTGTTGCC GTGGGAGAAG GGCGAACTGA TCCCGCTGAC GCTCGCCGAC TGGGATGTCG AAAAGGGCAC CATCGATCTG GTGGTGCAGG GCATGGGCAC CTCGTCGCTG GAGATCAACC GGATGGCGAT CGGCGACGCG TTCTCTGGCG TCGCCGGCCC GCTCGGCCGC GCCTCGGAGC TGCATCGCTA CGAGGGCAAC CAGACCGTGG TGTTCTGCGC CGGCGGCGTC GGCCTGCCGC CGGTCTATCC GATCATGCGG GATCATCTGC GGCTCGGGAA CCACGTCACG CTGATCTCCG GCTTCCGCGC CAAGGAGTTC CTGTTCTGGA CCGGCGACGA CGAGCGCGTC GGCAAGCTCA AGCAGGAGTT CGGCGACCAG CTGTCGCTGA TCTACACCAC CAATGACGGC AGCTATGGCG TCAAAGGCTT CGTCACCGGA CCGCTCGAAG AGATGATGAA GGCCAACCAG CAGGGCATCG GCCGCACCAT CGCGGAGGTG GTCGCGATCG GCCCGCCGCT GATGATGCGG GCGGTCTCCG ACCTGACCAA GCCGTATGGC GTGAAGACGG TGGCGAGCCT CAACTCGATC ATGGTGGACG CCACCGGCAT GTGCGGCGCC TGCATGGTGC CGGTGACGAT CGACGGCAAG ATGGTGCGCA AACACGCCTG CATCGACGGC CCGGAGATCG ACGCCCACAT CATCGACTGG GACAAGTTCC TGCCGCGCTT CAACGCCTTC AAGGCGCAGG AGCTGGAGAG CAAGGCCAAG CACGGCTTCG CGTAA
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Protein sequence | MSSVTGTIPN EVLRYEQARS TLETSRNELE ELQHSEAVGV FQKQIALLQK RLLNDPASLR NMFISDGTQA IVWEFQQSEL GAAFTTMLWE LLKRDDDMSA ILQRFIWALP LKFKRKFIKA IDVHLRERYP MFENLSEGWP GETFIPPYIR PAEERAVDFD LVNQGYLGYQ SIGYSLRECE LFVWLEVLRD KQCDDKPCEI GILVHGKSEP KGGCPVKIHI PEMLDLLGTG RHREALELIE SCNPLPNVTG RVCPQELQCQ GVCTHTKRPI EIGQLEWYLP EHEKLVNPNA NDRFLGRVSP WAAAAKPPIA VVGSGPSGLI NAYLLAVEGF PVTIFEAFHD LGGVLRYGIP EFRLPNTLID DVVEKITLLG GRFVKNFVVG KTATLEDLKA EGFWKIFVGT GAGLPTFMNV PGEHLLGVMS ANEFLTRVNL MRGLDDRYET PLPETKGKNV FVIGGGNTAM DAARTAKRLG GNVTIVYRRT QSEMPARVEE LHHALEEGIN LAVLRAPREF IGDDHTHFVT HALLDVNELG EPDKSGRRSP KPTGEIERVP VDLVIMALGN TANPIMKDAE PGLKTNKWGT IEVEQGSQRT SIKDVYSGGD AARGGSTAIR AAGDGQAAAK EIVGEIPFTP AEIKTRVERA ARYTELGQIA QTIVNKVPLA GGIVEFTVRA PMVARSAQAG QFVRVLPWEK GELIPLTLAD WDVEKGTIDL VVQGMGTSSL EINRMAIGDA FSGVAGPLGR ASELHRYEGN QTVVFCAGGV GLPPVYPIMR DHLRLGNHVT LISGFRAKEF LFWTGDDERV GKLKQEFGDQ LSLIYTTNDG SYGVKGFVTG PLEEMMKANQ QGIGRTIAEV VAIGPPLMMR AVSDLTKPYG VKTVASLNSI MVDATGMCGA CMVPVTIDGK MVRKHACIDG PEIDAHIIDW DKFLPRFNAF KAQELESKAK HGFA
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