| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0952 |
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| Symbol | |
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| ID | 4021427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1069761 |
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| End bp | 1072277 |
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| Gene Length | 2517 bp |
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| Protein Length | 838 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637961143 |
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| Product | glycogen/starch/alpha-glucan phosphorylase |
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| Protein accession | YP_568091 |
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| Protein GI | 91975432 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0058] Glucan phosphorylase |
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| TIGRFAM ID | [TIGR02093] glycogen/starch/alpha-glucan phosphorylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCAGTGC AGTCCGTGTT CGAGAAGCTT CAGCAACAAC AGCCGCCGAT CGATGAGCTG
GCGCTCTCCG AGATCAAGAG TGCCATTCTG GCGAAGCTGA CGCTTGTGAT CGGCAAGGCG
GCGACGCAGG CGACCAAGCA CGACTGGTAC AAAGCCTCGG CGCTGGCGCT GCGCGACCGC
ATCGTGCACC GCTGGCTTGT TTCGGAAAAG GAGAGCTACG ACGCCGGCCG CAAGCGGGTG
TATTACCTCT CGCTGGAGTT CCTGATCGGC CGGCTGTTCA CCGATGCACT GAACAATATG
GGCCTGCTCG CGCAATACGC CGCTGCGCTC GGCGACCTCG GCGTCGGCCT CAACGATCTG
CGCAAATGCG AGCCCGACGC GGCGCTGGGC AATGGCGGCC TCGGCCGGCT TGCCGCCTGC
TTCATGGAAA GCATGGCGAC GCTGGAGATC CCGGCCTTCG GCTACGGCAT CCGCTACGAT
TACGGCCTGT TCCGGCAGAT CATCAATCAT GGCTGGCAGC AGGAATTCCC GGACGAGTGG
CTGTCTTTCG GCAACCCCTG GGAGCTGCAG CGGCCCGAGG TCGTTTATCA GGTGAAGTTC
GGCGGCAGCG TCGAGCAAGT CACCGACGCC AAGGGGCTGA CGCGGGCGGT GTGGACACCG
GTCGAAACGG TGCAGGCGAT GGCGTACGAC ACGCCGATCG TCGGCTGGCG CGGCGAGCAC
GTCAATGCGC TGCGGCTTTG GTCGGCGCGA GCGCCCGATC CGATGCTGAT CGACGTGTTC
AACACCGGCG ACTATCTCGG CGCCACCGCC CACGAGGCGC GCGCCGAGGC GATCTGCAAA
TTTCTCTATC CTAACGACGA GAGCGCCGCC GGCCGCGAAT TACGGCTGCG GCAGGAGTAT
TTCTTCGTCT CCGCCTCGCT GCAGGATCTG ATCCAGCGGC ATCTCGACTC CGACGGGCAG
ATCCGCAGCC TCGCCAAGAG GGCTGCGATC CAGCTCAACG ACACCCATCC GAGTCTCGCC
GTTACCGAGC TGATGCGGCT ATTGGTCGAC GTCCATCATT TGCGCTGGGA CGACGCCTGG
CAGATCACAA TTGCGACGCT CAGCTACACC AACCACACGC TGCTGCCGGA GGCGCTGGAG
ACCTGGCCGC TCGACCTGTT CGAGCGCACG CTTCCACGGC ATCTCCAGAT CATCTACCGC
ATCAACGAGG CGCATCTCGC GCTCGCCGAG GTGCGCTGCC CCGGCGACAT CGAGTTCCGC
GCGTCGGTGT CGCTGATCGA CGAGAGAGGC GGGCGCCGCG TCCGGATGGG CCACCTTGCC
TTCATCGGCT CGCACCGGAT CAACGGCGTG TCGGCGATGC ATTCCGACCT GATGCAAGAG
ACCGTGTTTC ACGATCTCAA TCATCTCTAT CCCGGCCGCA TCACCAACAA GACCAACGGC
ATCACCTTCC GGCGCTGGCT GACGCTGGCG AATCCGGGGC TGACCAATCT GGTCCGCGCG
GCCTGCGGCG ACGAGGTGCT CGACGATCCG ACCCAGCTGC AGCGCCTCGA GGCGTTCGCC
GGCGACAGCG CGTTCCAGCA GCAGTTCCGT TCGGTCAAGC ACCGCAACAA GATCGCGCTG
GCGCGGCTGA TCAGCGAGCG CAACGGCGTC CGGATCGATC CGGGCGCGCT GTTCGACGTG
CAGATCAAGC GCATCCACGA ATACAAGCGG CAACTGCTCA ACGTGCTCGA GACCGTGGCG
CTGTATCACG CGATCAAGGA CGAGCCGAAC CGCGACTGGG TGCCGCGGGT CAAGATCTTC
GCCGGCAAGG CGGCGGCGAG CTACCGCTAC GCCAAGCTGA TCATCAAGCT GATCAACGAC
ATCGCCGAGG TGATCAACAA CGACGAATCG ATCGGCGGCA AGCTGAAGGT GGTGTTCCTC
GCCGACTACA ATGTCAGCCT CGCCGAAGTG ATCATCCCCG CCGCCGATCT GTCGGAACAG
ATCTCGACCG CCGGCATGGA AGCCTCGGGC ACCGGCAACA TGAAGCTGGC GCTCAACGGC
GCGCTGACGA TCGGCACGCT GGACGGCGCC AATATCGAAA TCCGTGATCA CGTCGGCGCG
GAGAACATCG CGATCTTCGG CATGGAAGCG CTCGAAGTGG TGGCGCGGCG CGCCCAGGGG
CTCGACGCCA ACGACGTCGT CAGCCGCTCG CCGCAACTCG CCCGCGCGAT CCGCGCGATC
GACGCCGGCG CGTTCTCGCC CGACGATCCG GCGCGGTTCG CCTCGGTGGC GCACGCGCTG
CGGCATCTCG ACCACTACAT GGTCAGCGCC GATTTCGACA GCTACTACGA AGCCCAGCGC
GGCATCGACG CGCGCTGGCG CGCCGGCTCC GCCTGGACCC GCGCCGGCAT CCTCAACGTC
GCGCGGATGG CATGGTTCTC CTCGGACCGC ACCATCCGCG AATACGCCGA GGACATCTGG
GACGTGCCCA CCCGCCACGC GACGCAGCCC TCGCCGGCAC GGCGCGCGAA GGGATAG
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| Protein sequence | MPVQSVFEKL QQQQPPIDEL ALSEIKSAIL AKLTLVIGKA ATQATKHDWY KASALALRDR
IVHRWLVSEK ESYDAGRKRV YYLSLEFLIG RLFTDALNNM GLLAQYAAAL GDLGVGLNDL
RKCEPDAALG NGGLGRLAAC FMESMATLEI PAFGYGIRYD YGLFRQIINH GWQQEFPDEW
LSFGNPWELQ RPEVVYQVKF GGSVEQVTDA KGLTRAVWTP VETVQAMAYD TPIVGWRGEH
VNALRLWSAR APDPMLIDVF NTGDYLGATA HEARAEAICK FLYPNDESAA GRELRLRQEY
FFVSASLQDL IQRHLDSDGQ IRSLAKRAAI QLNDTHPSLA VTELMRLLVD VHHLRWDDAW
QITIATLSYT NHTLLPEALE TWPLDLFERT LPRHLQIIYR INEAHLALAE VRCPGDIEFR
ASVSLIDERG GRRVRMGHLA FIGSHRINGV SAMHSDLMQE TVFHDLNHLY PGRITNKTNG
ITFRRWLTLA NPGLTNLVRA ACGDEVLDDP TQLQRLEAFA GDSAFQQQFR SVKHRNKIAL
ARLISERNGV RIDPGALFDV QIKRIHEYKR QLLNVLETVA LYHAIKDEPN RDWVPRVKIF
AGKAAASYRY AKLIIKLIND IAEVINNDES IGGKLKVVFL ADYNVSLAEV IIPAADLSEQ
ISTAGMEASG TGNMKLALNG ALTIGTLDGA NIEIRDHVGA ENIAIFGMEA LEVVARRAQG
LDANDVVSRS PQLARAIRAI DAGAFSPDDP ARFASVAHAL RHLDHYMVSA DFDSYYEAQR
GIDARWRAGS AWTRAGILNV ARMAWFSSDR TIREYAEDIW DVPTRHATQP SPARRAKG
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