Gene RPD_0951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0951 
Symbol 
ID4021426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1068569 
End bp1069729 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content66% 
IMG OID637961142 
Producthypothetical protein 
Protein accessionYP_568090 
Protein GI91975431 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAGCCGC GCTCACGTCA TCGGACAGCG CAACCTCCCG CTTGCGGGGG AGGTCGGATC 
GCGCGGCGAT CCGGGAGGGG AAGTGCTCTC GCAGCATCGC CGGGTCAGTG CTCGGCTCGC
CCTCACCCCA ACCGTCTCCC GCAAGCGGGA GAGGGAGCAG AAGGCGCGCG CATTTTACAT
CGATGCTTCC CAGCCAAGCG GAGGGGAGCA TCGCGACAGC CACTCGCCCA TCACATGATG
ATCGACAGCC ATTGCGCTGA CCCGCGGCGC GGGGCAAGTT GCGCTGGGCA GAGCCGGACA
AGACCAATAA GAAACAAGGG AGAGACCATG GACGCCAAGG TAGAGCATCA GCCGCATCCG
TTCGACGCCG CGACGCAGGT CGAATGCACC GACGGGCGCT GGCGCGGGGC GACCAGCGAC
GACTATCACG CCTTCGTCGG CCAGTTCGGC GGCGCCACAA CGGCGACGCT GCTGAGGGCG
CTGATGGCGC ATCCCGACCG CGCCGGCGAT CCGTTGGCGC TGACTGTGAA TTTTTGCGCG
CCGGTTTCGA ACGGCGCATT CGATCTCGCG CCGCGGCTGG TGAAGGCAAC GCGCTCGACC
CAGCACTGGT CGATCGACCT CACGCAGCCC GATGTCGGCG TCGCCGCGTT CGGCACCGCC
GTGTTCGCGC AGCGCCGCGA GACCTGGTCG CACCAGCCGG CCGAGAAGCC GCAGACCTCG
CATTACGAAG ACACGCCGGT GTATTCGAGG GCCGGCGTTG CCGCCGCCTG GATCCGCCAG
TTCGAATTTC GCTTCGCCGA GAACGCACCG AATTTCGGCG GCGCGCCGCA TCCGGAGCCG
GCGAGCCCGC ATACAAAAGC GTGGATCGGC CACAGCGTGC CGCGGGTGAT CGATTTGATC
TCGCTGTCGG CGATCGCGGA TGCGTTCTTT GCGCGGATCT TCCACGTCCG CGGCGAATTG
CTGCCGATCG GCACGGTGTC GATGACGACG TATTTCCACG TCGACGCGGC CGACCTTGCG
ACCGAGGCCA CGACCGCGGT GCTCGGCGTC GCGGACGCCA ACGTTTTTCA CAAGAGTTTC
AGCGACCAGA CCGGGGAACT GTGGTCGGCC AGCGGGCGTT TGCTGGCGAC CACGCATCAG
ATCACCTATT TCAAGGCCTG A
 
Protein sequence
MQPRSRHRTA QPPACGGGRI ARRSGRGSAL AASPGQCSAR PHPNRLPQAG EGAEGARILH 
RCFPAKRRGA SRQPLAHHMM IDSHCADPRR GASCAGQSRT RPIRNKGETM DAKVEHQPHP
FDAATQVECT DGRWRGATSD DYHAFVGQFG GATTATLLRA LMAHPDRAGD PLALTVNFCA
PVSNGAFDLA PRLVKATRST QHWSIDLTQP DVGVAAFGTA VFAQRRETWS HQPAEKPQTS
HYEDTPVYSR AGVAAAWIRQ FEFRFAENAP NFGGAPHPEP ASPHTKAWIG HSVPRVIDLI
SLSAIADAFF ARIFHVRGEL LPIGTVSMTT YFHVDAADLA TEATTAVLGV ADANVFHKSF
SDQTGELWSA SGRLLATTHQ ITYFKA