| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0939 |
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| Symbol | |
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| ID | 4021414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1055236 |
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| End bp | 1055616 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637961130 |
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| Product | carboxymuconolactone decarboxylase |
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| Protein accession | YP_568078 |
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| Protein GI | 91975419 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
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| TIGRFAM ID | [TIGR02425] 4-carboxymuconolactone decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.947177 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACAAGA CCACACACGA CAAGGGGCTG GACATCCGCA AGGCCGTGCT GGGCGAAGCC
TATGTCGAAA ACGCGTTGAA GAACTCCGAC GACTTCAACA AGCCGTTCCA GGAACTGGTC
ACCGAATATT GCTGGGGCGC GATCTGGGGC CGCGAGGAAT TGCCGCGCAA GACCCGCAGC
ATGCTCAATC TGGCGATGAT CGCGATTCTG AACCGGCCGC ACGAATTGCG GGCGCATATC
AAGGGCGCGC TCACCAACGG CGTCACCAAG GATGAGATCC GCGAGATCTT CATGCAGGTG
GCCTGCTACG CCGGGATTCC CGCCGGCGTC GACAGTTTCC GGATCGCCCG CGACGTGTTC
GCCGAACTCG ACAAAGCCTG A
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| Protein sequence | MDKTTHDKGL DIRKAVLGEA YVENALKNSD DFNKPFQELV TEYCWGAIWG REELPRKTRS
MLNLAMIAIL NRPHELRAHI KGALTNGVTK DEIREIFMQV ACYAGIPAGV DSFRIARDVF
AELDKA
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