| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0938 |
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| Symbol | |
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| ID | 4021413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1053739 |
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| End bp | 1055004 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637961129 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_568077 |
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| Protein GI | 91975418 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCATT TCGACTACCG CGACGGCGTG CTGCACGCCG AGGACGTCAG CCTTGCGTCG
ATCGCGCAGG CGGTCGGCAC GCCGTTTTAT TGCTACTCCA CCGCGACGCT GGAGCGGCAC
TACCGGGTCT TCACCGAGGC CCTCAGCGGC GTCGACGCGC TGGTCTGCTA CGCGATGAAG
GCCAATTCCA ATCAGTCGGT GCTGCGCACG CTGGCCAAGC TCGGCGCCGG CGCCGATGTG
GTGTCGGGCG GTGAGCTGAA GCGCGCGCTG GCCGCAGGCA TCCCGCCGGG CAAGATCGTG
TTCTCCGGCG TCGGCAAGAC CGAGGCCGAG CTGCGCGCCG CGCTGGCCCA CGACATCAAA
TGCCTCAACG TCGAGTCCGA ACCCGAGCTC GAACTGCTGT CGCGGCTCGC GGTCGAGACC
GGCCGCATCG CGCGGATCTC GATCCGGGTC AATCCGGATG TGGATTCAGG CACCCACGCC
AAGATCTCGA CCGGCAAGTC GGAGAACAAG TTCGGCATTC CGATCCGCCA CGCCCGCGAC
GTCTATGCCC GCGCGGCGAA GCTGCCCGGC ATTCAGGTCA CCGGCGTCGA CGTGCATATC
GGCAGTCAGA TCATCGATCT TGCGCCGATG GAATCCGCGT TCCGCCTCGT CGCCGAGTTC
GTGCACGTGC TGCGCGGCGA CGGTCACACG ATCAGCCACG TCGATTTCGG CGGCGGCCTC
GGCATTCCAT ACTACGAGGA TCGCGCCGCG CCGCCGGAAC CGTTCTCCTA TGCGGAGATG
GTCAAGCGTA TCACCCACAA TCTCGGCTGC ACGCTGATGT TCGAGCCGGG CCGGACGATC
GTCGGCAATG CCGGCATCCT GGTCGCGCAA GTGATCTATG TGAAGCACGG CGACGGCAAG
ACCTTCGTGG TCATCGACGC CGCGATGAAC GACCTGATCC GGCCGACGTT GTACGAGGCC
TATCACGAGA TCCTGCCGGT CGCGGAGCCT GCGCCCGGCG TGAAGATGAT CACCGGTGAC
GTCGTCGGTC CGGTCTGCGA GACCGGCGAT TACCTCGCGC TCGACCGCCA GTTGCCGGAG
CTGAAATCCG GCGACCTGAT CGCGATCATG ACCGCCGGCG CCTACGGCGC GGTGCAGGCG
TGTACCTACA ACACCCGTGC GCTGGTGCCC GAAGTGCTGG TGAAGGACGA TCAATACGCC
GTGGTGCGCC CGCGCATCGA GGTCGAGCAA CTGATCGCGA TGGACCAGCC GGCGCCATGG
CTGTGA
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| Protein sequence | MRHFDYRDGV LHAEDVSLAS IAQAVGTPFY CYSTATLERH YRVFTEALSG VDALVCYAMK
ANSNQSVLRT LAKLGAGADV VSGGELKRAL AAGIPPGKIV FSGVGKTEAE LRAALAHDIK
CLNVESEPEL ELLSRLAVET GRIARISIRV NPDVDSGTHA KISTGKSENK FGIPIRHARD
VYARAAKLPG IQVTGVDVHI GSQIIDLAPM ESAFRLVAEF VHVLRGDGHT ISHVDFGGGL
GIPYYEDRAA PPEPFSYAEM VKRITHNLGC TLMFEPGRTI VGNAGILVAQ VIYVKHGDGK
TFVVIDAAMN DLIRPTLYEA YHEILPVAEP APGVKMITGD VVGPVCETGD YLALDRQLPE
LKSGDLIAIM TAGAYGAVQA CTYNTRALVP EVLVKDDQYA VVRPRIEVEQ LIAMDQPAPW
L
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