Gene RPD_0935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0935 
Symbol 
ID4021410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1051227 
End bp1051895 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content69% 
IMG OID637961126 
Productthioredoxin-like 
Protein accessionYP_568074 
Protein GI91975415 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0526] Thiol-disulfide isomerase and thioredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGA CCCAGCCCGA TCCCGTCCCG CCGCGCCGCG CCGGCCGCCG CACCATCATT 
CTGGCCGCGA TCGCCGTGCT CGTCGTCGCC GGAGCAGCCG GGGTATACGG GATTGCCGGG
CTTCAGCGCA ATGCATCGGG CGATCCGGCC TGCCGGCCGG CGCTGGCGCT GGCGCAGCAG
CTCAAGCCGC TGGCGCGCGG CGAAATGGCG GCGGTGACGA TGGCGTCGTC GCCGCTGAAG
CTGCCCGACC TCGCCTTCGA GGACGGCAGC GGCCAGCCGA AGAAGCTGTC CGACTTCCGC
GGCCGAACCC TGCTGGTGAA CCTGTGGGCG ACCTGGTGCG TGCCCTGCCG CAAAGAGATG
CCCGCGCTCG ACAATCTGCA GGCCAAGCTC GGATCGGCGG ATTTCGAGGT GGTCGCGATC
AACATCGACA CCCGCGACCC GGCCAAGCCG AAGAAGTTTC TCGAAGACGA GAAGCTGACC
AGACTGAGCT ACTTCAGCGA CGCCTCGGCC CGGGTGTTCC AGGACCTCAA GGGCATCGGC
CGCGCGCTCG GAATGCCGAC CTCGGTGCTG GTCGACGGCC AGGGCTGCGA GATCGCCACC
ATCGCGGGCC CTGCGGAATG GGACAGCGCG GATGCGCTGG CCTTGGTCAA AGCGAGCCTC
GCCCGCTGA
 
Protein sequence
MTETQPDPVP PRRAGRRTII LAAIAVLVVA GAAGVYGIAG LQRNASGDPA CRPALALAQQ 
LKPLARGEMA AVTMASSPLK LPDLAFEDGS GQPKKLSDFR GRTLLVNLWA TWCVPCRKEM
PALDNLQAKL GSADFEVVAI NIDTRDPAKP KKFLEDEKLT RLSYFSDASA RVFQDLKGIG
RALGMPTSVL VDGQGCEIAT IAGPAEWDSA DALALVKASL AR