| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0908 |
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| Symbol | |
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| ID | 4021382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1023877 |
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| End bp | 1025328 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637961098 |
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| Product | multi anti extrusion protein MatE |
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| Protein accession | YP_568047 |
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| Protein GI | 91975388 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0522974 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGACA TTGCCGTCGC CGAACTGCCG CCCGTCGAGG ACGAGCCGCG GCGCCGGCCG
GCAGCCGAGC CGCCGCCACC GCCGAACAAT CCGCTGCTCG ACGACGCCAT CCTGCCGACG
CTGCTGCGGC TGTCCTGGCC CAACATGGTG GCGCTGACCG CCGGCACCTG CGTCGCGGTG
GCCGAGACCT CCTATATCGG CCGGCTCGGC ACCGAATCGC TGGCGGCGAT GGCGCTGGTG
TTCCCGTTCG TGATTCTGAC GATGACGATG TCCGGCGGCG CGATGGGTGG CGGCGTCGCC
TCGGCGATCG CCCGCGCGCT CGGCTCCGGC GACAGCGACC GCGCCGCCAC GCTGGCGATG
CACGCGCTGC TGATCGGGCT GTGTTTCGGC TTCGCTTTCA TGCTCGGGAT GCTGATCTTC
GGCGCCCGCG CGCTGGAGCT GCTCGGCGGC CGTGGCAATG TGCTGACGCA GGCGATCGGC
TACGTCCACA TCTTCTTTGC CGGCGCAATG GTGCCGTGGC TGATGAACAC CTTCGCGGCG
ATCCTGCGTG GCACCGGCAA TATGAAGCTG CCGTCGCTGA TGATTCTGAA TGCGGCGGTG
TTGCAGATCG TGCTCGGCGG CGTGCTCGGC CTCGGCCTCG GTCCGATCCC GAGCTTCGGG
ATGCAGGGCG TCGCCGCCGG CACGCTGATC GCGTTCTCGA TCGGCACCGC GGTGATGGCC
TGGTACATCT TCTCCGGACG CGCCCGGGTG ACGCCGAAAT TCAAGGGGCT GCGGATCCAG
CGCGGGATGT TCTTCGACAT TCTCAAGGTC GGCGCGGTGG CTTGCTTCTC GCCGCTGCAG
TCGGTGCTGA CGATCACCAT CTTCACCCAC ATGCTGGCGC ATTTCGGCAC CGAGGTTCTC
GCCGGCTACG GCATCGGCGC GCGGCTCGAA TTCATGCTGA CCTCGATCGC TTTCGCGATC
GGCATCGCGT CGGTGCCGAT GATCGGCATG GCGATCGGCG CCCGGCAGGT GAAGCGCGCG
CGGCAGATCG CCTGGACCGC CGGGCTGGTG TCGTTCGCCT CGGTCGGCGT GGTCGGCTGC
GTGATCGCGT TCTTCCCGGA TCTGTGGGTC GATCTGTTCA CCAAGGACCC CGCCGTGCGG
CTCGCCAGCG AACGCTATCT GCAGGCCGCA GCGCCGATGT ACGCTTTCAT CGGGCTGTCG
ATCTCGATGT ACTTCTCGTC GCAGGGCGCC GCCAAGGTGC TCGGCCCGGT GCTGGCGCAG
ACCGGGCGGC TGATCTTCAT CGGCATCGGC GGCTGGCTGC TGACGGTGAA CCACGGCACG
GCCGGAAACT TTTTCACGCT CGCCGCCGCC TCGATGGTGC TGCTCGGCGT CACCTCGGCG
CTCAGCGTGC TGCTGACGCG CTGGGAGCCC AAGGTCGTGC CGGTGGTCGA TCCGCGGTCA
TCGTTGTCGT GA
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| Protein sequence | MSDIAVAELP PVEDEPRRRP AAEPPPPPNN PLLDDAILPT LLRLSWPNMV ALTAGTCVAV
AETSYIGRLG TESLAAMALV FPFVILTMTM SGGAMGGGVA SAIARALGSG DSDRAATLAM
HALLIGLCFG FAFMLGMLIF GARALELLGG RGNVLTQAIG YVHIFFAGAM VPWLMNTFAA
ILRGTGNMKL PSLMILNAAV LQIVLGGVLG LGLGPIPSFG MQGVAAGTLI AFSIGTAVMA
WYIFSGRARV TPKFKGLRIQ RGMFFDILKV GAVACFSPLQ SVLTITIFTH MLAHFGTEVL
AGYGIGARLE FMLTSIAFAI GIASVPMIGM AIGARQVKRA RQIAWTAGLV SFASVGVVGC
VIAFFPDLWV DLFTKDPAVR LASERYLQAA APMYAFIGLS ISMYFSSQGA AKVLGPVLAQ
TGRLIFIGIG GWLLTVNHGT AGNFFTLAAA SMVLLGVTSA LSVLLTRWEP KVVPVVDPRS
SLS
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