| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0906 |
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| Symbol | |
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| ID | 4021380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1021215 |
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| End bp | 1022558 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637961096 |
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| Product | L-sorbosone dehydrogenase |
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| Protein accession | YP_568045 |
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| Protein GI | 91975386 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCGAA CTTTCAACAC CAGCCGCCTC GCCGCGTGCC TTGCCGTCGC GCTGCCGCTG
GCGGCCTGCG GCGATCAGGC CAATCTGACG CAGGGCGAGG ATTTCGGCGC GACCCCAAAA
CTCGCCGAGC CGAACAAGGC GCTGCTGCCG ACGGTCAACA TCGCCAAGGC GGTCGGCTTC
GCGGAGGGCG AGAAGCCGAC GCCCGCCGAC GGCATGACGG TGACCGCCTT CGCCACCAAG
CTCGATCATC CCCGCACCCT CCACGTGCTG CCGAATGGCG ACGTGCTGGT GACCGAGACC
AATGCGCCGG AGCAGCCCGA TCAGAACAAG GGCTTTAGGC GGATCGCGAC AGAATTCGTG
ATGGGCCGCG CCGGCGCGCG GACTCCGAGC GCCAACCGCA TCACCCTGTT GCGCGACGCC
GACGGCGACG GCGTGGCGGA GGTCCGCACC ACGTTTCTCG AAGGCCTGAA TTCGCCGTTC
GGCATGGCGC TGGTCGGCAA TGATTTCTAC GTCGCCAACA CCGACGGAAT CGTGCGCTTT
CCCTACACCC CCGGCGACAC CCGGATCACC GCCAGCGGCG CCAAGCTCGC CGATCTGCCG
GCCGGCCCGA TCAATCATCA CTGGACCAAG GATCTGATCG CCAGTCCGGA TGGAGCGAAG
CTGTATGCGA CCTCAGGCTC GAACAGCAAT GTCGGCGAAC ACGGCATGAA CAACGAGATC
AACCGCGCGG CGGTGCTCGA AATCGACCGG CAGAGCGGCG CAACGCGGCT GTTCGCCTCC
GGCCTGCGCA ACCCGAACGG CCCGGCATGG GAGCCGCAGA CCGGCGCGCT TTGGGTCGTC
GTCAACGAGC GCGACGAAAT CGGCAGCGAT CTCGTGCCGG ACTACATGAC CTCGGTGCAG
GACGGCGGCT TCTACGGCTG GCCTTACAGC TATTACGGCC AGACCGTCGA CGCGCGCATC
AAGCCGCCGC GACCGGATCT GGTCGCGAAG GCGATCAAGC CGGACTACGC GCTCGGCAGC
CACACCGCCT CGCTCGGCCT CGCCTTCAAC ACCGGCGATC TGTTCCCCGC CGAGATGAAA
GGCGGCGCCT TCATCGGCCA GCACGGCTCC TGGAATCGAA AGCCGCATTC CGGCTATAAG
GTGATCTACG TGCCGTTCGC CGGAGGCAAA CCGTCCGGCC CGCCACGCGA TATCCTCTCC
GGCTTCCTCA ACGACAAGGG TGAGGCCCTC GGCCGCCCGG TCGGCGTCGC CCTCGACAAA
CGCGGCGCGC TGCTGGTCGC CGACGACGTC GGCAATTCGA TCTGGCGCGT CGCGCCGGCG
GGGCGGGAGC AGGCGGCGCG ATAA
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| Protein sequence | MRRTFNTSRL AACLAVALPL AACGDQANLT QGEDFGATPK LAEPNKALLP TVNIAKAVGF
AEGEKPTPAD GMTVTAFATK LDHPRTLHVL PNGDVLVTET NAPEQPDQNK GFRRIATEFV
MGRAGARTPS ANRITLLRDA DGDGVAEVRT TFLEGLNSPF GMALVGNDFY VANTDGIVRF
PYTPGDTRIT ASGAKLADLP AGPINHHWTK DLIASPDGAK LYATSGSNSN VGEHGMNNEI
NRAAVLEIDR QSGATRLFAS GLRNPNGPAW EPQTGALWVV VNERDEIGSD LVPDYMTSVQ
DGGFYGWPYS YYGQTVDARI KPPRPDLVAK AIKPDYALGS HTASLGLAFN TGDLFPAEMK
GGAFIGQHGS WNRKPHSGYK VIYVPFAGGK PSGPPRDILS GFLNDKGEAL GRPVGVALDK
RGALLVADDV GNSIWRVAPA GREQAAR
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