| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0905 |
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| Symbol | |
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| ID | 4021379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1018962 |
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| End bp | 1020950 |
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| Gene Length | 1989 bp |
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| Protein Length | 662 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637961095 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_568044 |
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| Protein GI | 91975385 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.486466 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCATC GCGATCTGTC AGTTGGCCCG TCAGGCGGCG TGCTTGCAAC CCGGCGCTCG
TTTCTTCAAT CCTCGACGGC GTTCATCGGC GCCGTGTCCC TCGGCGTGCC GTTCGGCGGG
CCCACATGGG CAAGCGAGCC GCGGCGTTAC CCGATCGAGA CGCCGGCGGT GACCACGAAA
GAGCGGATGA TCGCCTTTCC GGCGACGCGG ACGCCCGGCC TGAAGAAGAC GGAGCTGAAC
CAGGTCGCGC GCTACAAGGA GCTCGGCTAT GGCGAATGGT CGTTCGGCTC CGGCCTGCCG
GTGGTCCAGC GCACCGACCT GATGCCCGCC GGCTATCAGA AGCCGGCGAA CGCGGCCAGG
ACTCGGCTGC TCAAATTCTT CTCGTTCTCC GATGTCCACA TCACCGACAA GGAAGCCCCG
AACCAGCTGA TCGCGTTCCA GCAGACCGAG CCCGCCGCCG CGAGCAACAC CTCGATCTAT
TCGCCGGTGA TGCTGTATTC GACGCAGGTG CTGGATGCGG CCGTGCAGAC GGTCAACGAT
CTGCACCAAC GCGACCCGTT CGATTTCGGC ATCGCGCTGG GCGACGCCTG CAACAGCACC
TCGTACAACG AGCTGCGCTG GTACATCGAC GTGCTCGACG GCAAGCCGAT CACGCCGAGC
TCCGGCAAGC ATCGCGGCAA GGACAGCATC GACTTTCAGA TGCCATTCCA GGCCGCAGGC
CTCGCCAAGG ATCTTCCCTG GTATCAGGTT CTCGGCAACC ACGATCATTT CATGATCGGA
TCGTTTCCGG TCGACGCCGA TCCGTCGATG GGCCTGCGGC AGACCTACAC CGCCGACAAG
GTCTGGGCGG TCGGCGATCT GCTGAGACCG AACCTCGCCG GCTTCCCGGC GCTGTTCGAC
TATCGCAAGC TGAAGGCCGA GCCGGCGTTC TATCCGGGCG TCATCGATGG CGCGAGCCCT
TATGGGGCGA TCATTCATGC CGGCCGCGCC GACGACCCGG CGTTCAACGG CCAGCCGCCG
CAGATCGACG CAGATCCCTT GCGCCGTCCT TTGCTCCGCG CCGAATGGCT CGCCGAATTC
CGCGACACCA CGACCAGCCC GAAGGGTCAC GGCTTCGATC TGGTCGACCA CGCCAGCGCC
GTCGACGGCT TTGCCTGCTA CAGTTTCCTG CCGAAAGCCG GCCTGCCGCT GAAGGTGATC
GTGCTCGACG TCACCCAGTC CGAACAGGAC GGCTCACGCG ACATTCACGG CCACGGCTTT
CTCGACGCGC GGCGCTGGGA ATGGCTCAAG GCCGAACTGG CGCGCGGACA GGCCGACAAT
CAGCTGATGA TCATCGCCAA CCACATTCCG ATCGGCGTCT CGCCGATCGG CTCCGAGATG
GAATGGTGGA TGGGCGACGC CAACGCAGCG CCCGGCTTCG CCAACGCCGT CGACCTCGCC
GGCCTGGTGC AGACGCTGCA GGCGACGCCG AATCTGTTGA TGTGGATCGC CGGGCATCGC
CACATGAACG TCGTCAAGGC GTTTCCCTCC GCCGATCCGA ACCGGCCGGA GCAAGGGTTC
TGGCAGGTCG AGACCTGTTC GCTGCGCGAC TTCCCGCAGC AGTTCCGAAC CTTCGAGATC
ACGCTCAACG CCGACTACAC GGTGTCGATC GAGGCCGTGA ACGTCGACGT CGCTGCTGCC
GAGGGAACGC CGGCGGCGCA GTCGCGCAAA TACGCCATCG CGACCCAGCA GATCATTCAG
AACGACATCA CCTTCAACAG CCCGAACTAC GCGACGGCCG GCGGCCGCGG CACGCTGCAG
GTCCCGAGCA TGGACCCGAC GAGGCCGCAA AGCGACGATC CCAAGGCGAC CGACCCCTCG
ATCCAGTTCG TCGACCTGAG CACGGCCGCA AAGCCGGTCC CGTATCACGC GTCGAGCAAT
GTCGAGCTGC TGAAGCAGCT CAGCCCGGAA ATGGTCAGCG TGCTGAAGCG GGCGGTGCCG
CTGCGGTAG
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| Protein sequence | MNHRDLSVGP SGGVLATRRS FLQSSTAFIG AVSLGVPFGG PTWASEPRRY PIETPAVTTK
ERMIAFPATR TPGLKKTELN QVARYKELGY GEWSFGSGLP VVQRTDLMPA GYQKPANAAR
TRLLKFFSFS DVHITDKEAP NQLIAFQQTE PAAASNTSIY SPVMLYSTQV LDAAVQTVND
LHQRDPFDFG IALGDACNST SYNELRWYID VLDGKPITPS SGKHRGKDSI DFQMPFQAAG
LAKDLPWYQV LGNHDHFMIG SFPVDADPSM GLRQTYTADK VWAVGDLLRP NLAGFPALFD
YRKLKAEPAF YPGVIDGASP YGAIIHAGRA DDPAFNGQPP QIDADPLRRP LLRAEWLAEF
RDTTTSPKGH GFDLVDHASA VDGFACYSFL PKAGLPLKVI VLDVTQSEQD GSRDIHGHGF
LDARRWEWLK AELARGQADN QLMIIANHIP IGVSPIGSEM EWWMGDANAA PGFANAVDLA
GLVQTLQATP NLLMWIAGHR HMNVVKAFPS ADPNRPEQGF WQVETCSLRD FPQQFRTFEI
TLNADYTVSI EAVNVDVAAA EGTPAAQSRK YAIATQQIIQ NDITFNSPNY ATAGGRGTLQ
VPSMDPTRPQ SDDPKATDPS IQFVDLSTAA KPVPYHASSN VELLKQLSPE MVSVLKRAVP
LR
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