| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0899 |
|---|
| Symbol | |
|---|
| ID | 4021373 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 1011976 |
|---|
| End bp | 1013430 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637961089 |
|---|
| Product | putative OpgC protein |
|---|
| Protein accession | YP_568038 |
|---|
| Protein GI | 91975379 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4645] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTGGG CGAACCGGCA ACGTGCCGGT CGCATTCCGC CGCAACGATC GCGACCTTCG
CCGCCGCAAC GCGGCCCGAC CGCCTGCAAG GCCCGTCCGG CTGAACCCGT TGCAAAATCT
TCGCCTGTCG GTGTGCAGGC TGATATATCA GCGCCAAGGC GCGATGTTGC GCCCGCCCGG
AGCCCCATGA CTCCCGTAGC CTCGTCCGTC GCTGAACCGA TCGCCGGAGC GCCGCCCGCG
AGCATCCCGC CGCAGGTCGA GACCGTTCCG CCGCCGGCGC CCCCACCGCA GCCGGCGCTG
CAAAAGCCTG CGCCGAAGCG CGAATTGCGG CTCGATCTGT TCCGCGGCCT GGCGCTGTGG
CTGATCTTCA TCGACCATCT GCCGGCCAAT ATTCTCACCT GGCTGACGAT CCGCAACTAC
GGCTTCAGCG ACGCCACCGA GATCTTCATC TTCATCTCCG GCTACACCGC CGCCTTCGTG
TATGGCCGCG CGATGCGCGA TCAGGGCGTG GTGGTGGCGT CGGCGCGGAT CATGAAGCGG
GTCTGGCAGA TCTACGTCGC CCACGTCTTC CTGTTCACCA TCTTCCTGGC CGAAATCTCC
TACGTCGCCA ACAGCTTCCA GAACCCGCTC TACACCGAGG AAATGGGGAT TCTGGATTTC
CTCAAGCAGC CCGACGTCAC CATTGTCCAG GCGCTGCTGC TGCGGTTCCG TCCGGTCAAC
ATGGACGTGC TGCCGCTTTA CATCGTGCTG ATGTTCTTCC TGCCGCCGAT CCTGTGGATG
ATGCGGCGCT CGCCCGACGT CGCTCTGGCG CTGTCGACAT TCCTGTATGC GGCGACCTGG
CAGTTCGACC TGCATCTGAC CGCCTATCCG AGCGGCGTCT GGGCGTTCAA TCCTTACGCA
TGGCAATTGC TGTTCGTGTT CGGCGCCTGG TGCGCGATGG GTGGGGCGCA GCGCCTGTCA
CGGGTGCTGG CGTCGCCGAT CACCCTCTGG GTGGCGGTCG CCTATCTGCT GGCGGCGTTC
TTCGTCACCC TGACCTGGCA CATGCCGCAG CTGTTCCATA CCCTGCCGAA ATGGCTGGAA
CAGTGGATGT ACCCGATCGA CAAGCCCAAT CTCGACGTGC TGCGGTTCGC GCATTTCCTG
GCGCTGGCGG CGATCACCGT CCGATTCCTG CACCGTGACT GGCGCGGCCT GAACTCGATC
TGGCTGCGGC CGTTGATCCT GTGCGGGCAG CATTCGCTGG AAATCTTCTG TCTGGGCATC
TTCCTTGCAT TCGCCGGCTA CTTCGTGCTG GCCGAGATCG CCGGCGGAGC GGTCATGCAT
TTCTTCGTCA GCTTGACCGG GATCATCATC ATGTCGGCGT CAGCATGGCT TTTTTCGTGG
TACAAGAACG CAGCGGCCAA GGGCGGAAGT CAAAAAACAA GCCCGGATGC CGATCTCGCG
GGGGGCGACG CATGA
|
|---|
| Protein sequence | MAWANRQRAG RIPPQRSRPS PPQRGPTACK ARPAEPVAKS SPVGVQADIS APRRDVAPAR
SPMTPVASSV AEPIAGAPPA SIPPQVETVP PPAPPPQPAL QKPAPKRELR LDLFRGLALW
LIFIDHLPAN ILTWLTIRNY GFSDATEIFI FISGYTAAFV YGRAMRDQGV VVASARIMKR
VWQIYVAHVF LFTIFLAEIS YVANSFQNPL YTEEMGILDF LKQPDVTIVQ ALLLRFRPVN
MDVLPLYIVL MFFLPPILWM MRRSPDVALA LSTFLYAATW QFDLHLTAYP SGVWAFNPYA
WQLLFVFGAW CAMGGAQRLS RVLASPITLW VAVAYLLAAF FVTLTWHMPQ LFHTLPKWLE
QWMYPIDKPN LDVLRFAHFL ALAAITVRFL HRDWRGLNSI WLRPLILCGQ HSLEIFCLGI
FLAFAGYFVL AEIAGGAVMH FFVSLTGIII MSASAWLFSW YKNAAAKGGS QKTSPDADLA
GGDA
|
|---|
| |