Gene RPD_0897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0897 
SymbolhslO 
ID4021371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1010279 
End bp1011292 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content68% 
IMG OID637961087 
ProductHsp33-like chaperonin 
Protein accessionYP_568036 
Protein GI91975377 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1281] Disulfide bond chaperones of the HSP33 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCGC AATCTCAAAA TCCCAAGACA TCCGATACGC CGCCGGTGCG TGCGCCGTCC 
GCGGTTCCGG TCGACGACAC GGTGCTGCCG TTCGAGGTCG GCCCGCTCGA CCTGCGCGGC
CGGCTGACGC GGCTCGGCCC GGCGCTCGAC GAGCTGCTGG AAAAACACGC GTATCCGACG
CCGGTCGCCA AGCTGCTCGG CGAGGCGATC GTGCTGGCGA CGCTGCTCGG CTCGTCTTTG
AAATTCGATG GCCGCTTCAT CCTGCAGACC CAGACCGATG GCCCGGTATC GTTCCTGATC
GTCGATTTCC AGGCGCCCGA CCGGCTGCGC GCCTATGCAC GGTTCGACGA GAGCCGGCTG
ACGCCCGGGC TCGATTCCGG CGCGCTGCTC GGCAACGGGC ATCTGGCGAT GACGATCGAC
CAGGGCGTGG ACATGAGCCG CTATCAGGGG CTCGTCGCGC TGCAGGGCGG CGGCCTCGAG
GAAGCGGCGC ACGAATATTT CCTGCGCTCC GAGCAGATCC CGACCAGGGT GCGGCTCGCA
GTCGGCGAGG AGTTGCGCAG CGGCGAGGGC GGCCGGCATC ACTGGCGCGC CGGCGGCATG
TTGTTGCAGT TTCTCCCCAA GAGTCCGGAG CGCGCGCGGC AGGCCGATCT GCATCCCGGT
GACGCGCCGG AGGGCGCTTC GGTCCACGCC GTGCAGGAAG ACGACGCCTG GGTCGAAGGC
CAGTCGCTGA TCGCGACCGT GGAGGACGTC GAACTGATCG ATCCGGACCT GTCCGGCGAG
CGGCTGCTGT ATCGGCTGTT TCACGAACGC GGCGTAAGGG TGTTCTCGTC GCTGCCGTTG
CGCGCGCAAT GCTCGTGCTC GCGCGACGCG GTGGCCGGCA TGTTGTCCCG CTTCGAGGCC
AAGGACCGCG CCGACATGGT CAAGGACGGC AAGGTCGTGG TGACCTGCGA GTTCTGCAGC
TCGGTTTACG AATTCACCCC GCAAGAGGCG GGCGTGGAGG AGGCGGGCGA GTAG
 
Protein sequence
MTSQSQNPKT SDTPPVRAPS AVPVDDTVLP FEVGPLDLRG RLTRLGPALD ELLEKHAYPT 
PVAKLLGEAI VLATLLGSSL KFDGRFILQT QTDGPVSFLI VDFQAPDRLR AYARFDESRL
TPGLDSGALL GNGHLAMTID QGVDMSRYQG LVALQGGGLE EAAHEYFLRS EQIPTRVRLA
VGEELRSGEG GRHHWRAGGM LLQFLPKSPE RARQADLHPG DAPEGASVHA VQEDDAWVEG
QSLIATVEDV ELIDPDLSGE RLLYRLFHER GVRVFSSLPL RAQCSCSRDA VAGMLSRFEA
KDRADMVKDG KVVVTCEFCS SVYEFTPQEA GVEEAGE