| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0895 |
|---|
| Symbol | argD |
|---|
| ID | 4021369 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 1007898 |
|---|
| End bp | 1009109 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637961085 |
|---|
| Product | acetylornithine transaminase protein |
|---|
| Protein accession | YP_568034 |
|---|
| Protein GI | 91975375 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
|---|
| TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAACG CTGCTGCTAC GTCCCATCTC CTGCCGGTAT TCGCGAGAGC GGATGTCGCT
TTCGAGCGCG GCGAGGGCGT TTGGCTGATC GCGACCGCCG GCGAGCGTTA TCTCGACTTC
ACCAGCGGCG TCGCGGTCAA TTCGCTCGGC CATTGCCATC CGCATCTGGT CGAGGCGCTG
CAGCAGCAAT CGGCGAAGCT GTGGCACACG TCGAACCTGT TCAAGAGCCC GGACGGCGAG
CGGCTTGCCG CGCGGCTGTG CGAGCAGAGC TTCGCCGATT ATGTGTTCTT CGCCAATTCG
GGCGCGGAAG CGATCGAATG CGCGCTCAAG ATGACGCGGC ACTATCAGTT CTCGAAGGGA
TCTCCGGAGC GCACCCGGAT CATCACCTTC GAAGGCGCGT TCCATGGCCG CACGCTGGCC
GCGCTCGCCG CCACCGGCTC GGCAAAGTAC CTGGAAGGCT ATGGCGACCC GCTCGATGGT
TTCGACCAGC TGCCGCTCGG CGATATCGAG GCGGTGAAGA AGGCGATCGG CCCGAATACC
GCCGGCATCC TGATCGAGCC GCTGCAGGGT GAGGGCGGCG TCCGCGCGCC GGAGCCGGCC
TTCTTCCGGG CGCTGCGTGA GTTGTGCGAC GCCAATGGCC TGCTGCTGGT GTTCGACGAA
GTCCAGACCG GGATGGGCCG CACCGGCGAA TTGTTCGCCT ATCAGCGGCT CGGCGTCGCG
CCCGACATCA TGGCGCTGGC GAAGGCGCTG GGCGGCGGCT TCCCGATCGG CGCCTGCCTC
GCCACCGCGG AAGCGGCCAA GGGCATGGCG CCGGGCTCGC ACGGCTCGAC CTTCGGCGGC
AATCCGCTGG CGGTTGCCGC GGCCAATGCG GTGCTCGACG TGATGCTGAA GCCCGGCTTC
TTCGATCACG CCAAGCGGAT GTCGCTGATC CTGAAGCAGA AGCTCGCCGG GATCGTCGAT
CGCTATCCGC AGGTGCTCAG CGAAGTGCGC GGCGAGGGCC TGCTGATCGG CCTCAAGGCG
GTGGTGCCGT CGGGCGATTT GGTCGCCGCG CTGCGCGACC AGAAACTGCT CACCGTCGGC
GCCGGCGACA ACGTCGTTCG CTTGCTGCCG CCGCTGATCG TCGACGAAGC CGAGATCGAA
GAGGCGGTGA CGCGGCTCGA GCGCGCCTGC GGCGTGCTGT CAGGCCAGGC CGCGCAGCGG
GAGGCGGTGT GA
|
|---|
| Protein sequence | MSNAAATSHL LPVFARADVA FERGEGVWLI ATAGERYLDF TSGVAVNSLG HCHPHLVEAL
QQQSAKLWHT SNLFKSPDGE RLAARLCEQS FADYVFFANS GAEAIECALK MTRHYQFSKG
SPERTRIITF EGAFHGRTLA ALAATGSAKY LEGYGDPLDG FDQLPLGDIE AVKKAIGPNT
AGILIEPLQG EGGVRAPEPA FFRALRELCD ANGLLLVFDE VQTGMGRTGE LFAYQRLGVA
PDIMALAKAL GGGFPIGACL ATAEAAKGMA PGSHGSTFGG NPLAVAAANA VLDVMLKPGF
FDHAKRMSLI LKQKLAGIVD RYPQVLSEVR GEGLLIGLKA VVPSGDLVAA LRDQKLLTVG
AGDNVVRLLP PLIVDEAEIE EAVTRLERAC GVLSGQAAQR EAV
|
|---|
| |