Gene RPD_0892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0892 
Symbol 
ID4021366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1005103 
End bp1005819 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content63% 
IMG OID637961082 
Productphosphate uptake regulator, PhoU 
Protein accessionYP_568031 
Protein GI91975372 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0704] Phosphate uptake regulator 
TIGRFAM ID[TIGR02135] phosphate transport system regulatory protein PhoU 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTTCG AACATACCAG CAAGGCGTTC GACGGCGACC TGCAGGAACT GACCCGGATG 
GTCGCCGAGA TGGGTGGTCT GGCGGAGCGT CAGATTGTCG ACGCGGTCGA TGCGCTGGTC
CGTCGCGACA TCGCGCTCGG CGCACGGGTC GTCGCGGCCG ATTCCGAGAT CGACCAGATG
CAACGCTCGA TCGAAGAGCG GGCGGTGCTG ACGATTGCGC GGCGGCAGCC GATGGCGGTC
GACCTGCGCG ACATCGTCGG CGCGATGCGG GTCGCCACCG ATCTCGAACG AATCGGCGAC
CTGTCGAAGA ACATCGCCAA GCGGGTCAAC GCGATCGACA GCGACTTTCA TCCACTGAAG
CTGATCCGCG GCCTCGAACA CATGACCGAT CTGGTGCAGT CGCAAGTCAA GGCGGTGCTC
GACGCCTACA CCGCGCACGA TCTGCCGGCC GCGATGGTGG TGTGGAACGG CGACGAAGAG
GTCGACGCGA TCTGCACCTC GCTGTTCCGC GAACTGCTGA CCTACATGAT GGAAGACCCG
CGCAATATTT CGTTCTGCAT CCACCTGATG TTCTGCGCCA AGAACATCGA GCGGATCGGC
GACCACGCGA CGAATATCGC CGAAACGGTG TTCTACATGG TCGAGGGCCA GCAGATCCTG
GACAAGCGGC CGAAGGGCGA CATGACGACG TTCGCGAACG CGACGCCGGG CAACTAA
 
Protein sequence
MGFEHTSKAF DGDLQELTRM VAEMGGLAER QIVDAVDALV RRDIALGARV VAADSEIDQM 
QRSIEERAVL TIARRQPMAV DLRDIVGAMR VATDLERIGD LSKNIAKRVN AIDSDFHPLK
LIRGLEHMTD LVQSQVKAVL DAYTAHDLPA AMVVWNGDEE VDAICTSLFR ELLTYMMEDP
RNISFCIHLM FCAKNIERIG DHATNIAETV FYMVEGQQIL DKRPKGDMTT FANATPGN