Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0892 |
Symbol | |
ID | 4021366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 1005103 |
End bp | 1005819 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637961082 |
Product | phosphate uptake regulator, PhoU |
Protein accession | YP_568031 |
Protein GI | 91975372 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0704] Phosphate uptake regulator |
TIGRFAM ID | [TIGR02135] phosphate transport system regulatory protein PhoU |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCTTCG AACATACCAG CAAGGCGTTC GACGGCGACC TGCAGGAACT GACCCGGATG GTCGCCGAGA TGGGTGGTCT GGCGGAGCGT CAGATTGTCG ACGCGGTCGA TGCGCTGGTC CGTCGCGACA TCGCGCTCGG CGCACGGGTC GTCGCGGCCG ATTCCGAGAT CGACCAGATG CAACGCTCGA TCGAAGAGCG GGCGGTGCTG ACGATTGCGC GGCGGCAGCC GATGGCGGTC GACCTGCGCG ACATCGTCGG CGCGATGCGG GTCGCCACCG ATCTCGAACG AATCGGCGAC CTGTCGAAGA ACATCGCCAA GCGGGTCAAC GCGATCGACA GCGACTTTCA TCCACTGAAG CTGATCCGCG GCCTCGAACA CATGACCGAT CTGGTGCAGT CGCAAGTCAA GGCGGTGCTC GACGCCTACA CCGCGCACGA TCTGCCGGCC GCGATGGTGG TGTGGAACGG CGACGAAGAG GTCGACGCGA TCTGCACCTC GCTGTTCCGC GAACTGCTGA CCTACATGAT GGAAGACCCG CGCAATATTT CGTTCTGCAT CCACCTGATG TTCTGCGCCA AGAACATCGA GCGGATCGGC GACCACGCGA CGAATATCGC CGAAACGGTG TTCTACATGG TCGAGGGCCA GCAGATCCTG GACAAGCGGC CGAAGGGCGA CATGACGACG TTCGCGAACG CGACGCCGGG CAACTAA
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Protein sequence | MGFEHTSKAF DGDLQELTRM VAEMGGLAER QIVDAVDALV RRDIALGARV VAADSEIDQM QRSIEERAVL TIARRQPMAV DLRDIVGAMR VATDLERIGD LSKNIAKRVN AIDSDFHPLK LIRGLEHMTD LVQSQVKAVL DAYTAHDLPA AMVVWNGDEE VDAICTSLFR ELLTYMMEDP RNISFCIHLM FCAKNIERIG DHATNIAETV FYMVEGQQIL DKRPKGDMTT FANATPGN
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