Gene RPD_0890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0890 
Symbol 
ID4021364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1003396 
End bp1004256 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content65% 
IMG OID637961080 
Productphosphate ABC transporter permease 
Protein accessionYP_568029 
Protein GI91975370 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0581] ABC-type phosphate transport system, permease component 
TIGRFAM ID[TIGR00974] phosphate ABC transporter, permease protein PstA 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCGA TTCAACGCAG TCCGATTTAC AATCGCCGTC ACCGCGTCGA TCTGGTGGTG 
AAAGTGCTGT GCTCCGCCGC CGCGGTGTTC GGCGTCACCT GGCTGGCGCT GATCCTGTTC
ACGCTGTTCT ACAACGGCCT CGCCGGCGTC AATTGGCAGG TGTTCACCCA GAACACGCCG
CCGCCCGGCT CGACCGAAGG CGGCCTGCTC AACGCCATCG TCGGTTCGGT GATCATGACC
GTGTTCGGCG TCGGCATCGG AGCGCCGCTC GGCCTGTTCG CCGGTACCTA TCTCGCGGAA
TACGGCAAGC ACGACCGGCT CACCTCGGTG ATCCGTTTCA TCAACGACAT CCTGCTCAGT
GCGCCGTCGA TCATCATCGG CCTGTTCATC TACGGCGCGG TGGTGGTGAC GATGGGCCGG
TTCTCGGCGC TCGCAGGCTC GCTGGCGCTG GCGGTGATCG TGATCCCGGT GGTGGTCCGC
ACCACCGAGG ACATGCTGCT ATTGGTGCCG AGCTCGCTGC GCGAGGCGGC GTCCGCGCTC
GGCCTGCCGC GGTCGCTGGT GATCCGCCGA ATCGCCTACC GCGCCGCGCG CGCCGGCCTG
ATCACCGGCA TCCTGCTCGC CACCGCGCGC GTCGCCGGCG AGACCGCGCC GCTGCTGTTC
ACCGCGCTCA GCAACCAGTT CTTCAGCCTC GACATGACCA AGACGATGGC GAACCTGCCG
GTGACCATCA ACAACTTCGT CCAGAGCCCC TATGCCTACT GGAAGCAGCT TGCCTGGACC
GGCGCGTTGC TGATCACCTT GACTGTGCTT GCCCTGAACA TTGGTGCGCG CATCATCGGC
GCCGAGAGGA CCACGAAATG A
 
Protein sequence
MSSIQRSPIY NRRHRVDLVV KVLCSAAAVF GVTWLALILF TLFYNGLAGV NWQVFTQNTP 
PPGSTEGGLL NAIVGSVIMT VFGVGIGAPL GLFAGTYLAE YGKHDRLTSV IRFINDILLS
APSIIIGLFI YGAVVVTMGR FSALAGSLAL AVIVIPVVVR TTEDMLLLVP SSLREAASAL
GLPRSLVIRR IAYRAARAGL ITGILLATAR VAGETAPLLF TALSNQFFSL DMTKTMANLP
VTINNFVQSP YAYWKQLAWT GALLITLTVL ALNIGARIIG AERTTK