| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0888 |
|---|
| Symbol | |
|---|
| ID | 4021362 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 1001147 |
|---|
| End bp | 1002157 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637961078 |
|---|
| Product | periplasmic phosphate binding protein |
|---|
| Protein accession | YP_568027 |
|---|
| Protein GI | 91975368 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0226] ABC-type phosphate transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR00975] phosphate ABC transporter, phosphate-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTCA TCAAGTCTAT CGTCGCAGCC GGACTGGTTG CGGCGTCGAC CTCGGCATTC
GCTGCCGACA TCACCGGCGC CGGCGCCACC TTTCCGTTCC CGCTGTATTC GAAATGGGCG
GACGCTTACA AGAAAGAGAC CGGCAACGGC CTGAACTACC AGTCGATCGG CTCGGGCGCC
GGCATCAAGC AGATCATCGC CAAGACCGTG ACGTTCGGCG CAAGCGACAT GCCGCTGAAG
CCCGAGCAGC TCGAGAAGGA AGGCATGATC CAGTGGCCCC AGGCGATGGG CGCGCTGGTT
CCGGTCGTGA ATCTCGAAGG CGTCCAGCCC GGCGAGCTGG TGTTCACCGG CGAAGTGCTG
GGTGACATCT ATCTCGGCAA GATCAAGACC TGGAACGATC CGGCGATCGT CAAGCTCAAT
CCGAAAGCGA AGTTGTCGGG CGACGCGATC ACCGTGGTTC GCCGCTCCGA CGGCTCGGGA
ACGACGTTCC TGTGGACCGA CTATCTGACG AAGGTCAACG CCGAGTGGAA GTCGAAGGTT
GGCTCCGGCA CCGCGGTGGA ATGGCCGGTC GGCGTCGGCG CCAAGGGCAA TGAAGGCGTT
GCCGGCAACG TCAGCCAAAC CAAGAATTCG ATCGGCTACG TCGAATACGC CTATGCCAAG
CAGAACAAGC TGACCTACGC CGGCGTCGTG AACAAGGCCG GGAAGACGGT GCAGCCGACC
ATCGGCGCTT TCCAGGCTGC GGCCGCCAAT GCCGATTGGG CCGGTTCGAA GAACTACTAC
GTCATCCTGA CCGATCAGCC CGGCGAGGCC TCGTGGCCGA TCACCGGTGC GACCTTCATC
CTGATGCACA AGGATCCGTC CGACAAGGCG GCCTCTTCGG AAGCCATCAA GTTCTTCAAG
TGGGCGTTCG AGAAGGGCGA CAAGATGGCC GAAGAACTCG ACTACATCCC GATGCCGGAG
CCGGTGGTTA AGCTGATCGA GAAGACCTGG TCGGCCGACA TCAAGAGCTG A
|
|---|
| Protein sequence | MNFIKSIVAA GLVAASTSAF AADITGAGAT FPFPLYSKWA DAYKKETGNG LNYQSIGSGA
GIKQIIAKTV TFGASDMPLK PEQLEKEGMI QWPQAMGALV PVVNLEGVQP GELVFTGEVL
GDIYLGKIKT WNDPAIVKLN PKAKLSGDAI TVVRRSDGSG TTFLWTDYLT KVNAEWKSKV
GSGTAVEWPV GVGAKGNEGV AGNVSQTKNS IGYVEYAYAK QNKLTYAGVV NKAGKTVQPT
IGAFQAAAAN ADWAGSKNYY VILTDQPGEA SWPITGATFI LMHKDPSDKA ASSEAIKFFK
WAFEKGDKMA EELDYIPMPE PVVKLIEKTW SADIKS
|
|---|
| |