Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0884 |
Symbol | |
ID | 4021358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 996686 |
End bp | 998080 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637961074 |
Product | OmpA/MotB |
Protein accession | YP_568023 |
Protein GI | 91975364 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.138624 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.799439 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGGAC TTTTCAGATC GAGCGGCCAG TGGTGGCGCG GCGCCATCAT TCTTATCGCT CTATGGGCGA TCGCGGCGTG GACCACCACG CCGGCCGTGG AAGCCGATGT CGCCGAGCGG TCCGCCGCAG CGCTCAAGAG TACGGTGCTG GACAAGACCC GGCTGACGGC AGCCGGCCGC GACATTGCAT TCTCTGCCGA TGCGTTCTCC GAAGAGGGCC GCCGCAGCGC GGTCGCCGCG GTCGAAAGCG TCCCTGGCGT CCGGCTGGTG GTCGACCAGA CCCGGCTGGT TCCGCTGGCG TCGCCATTCG TCTGGTCGGT CGAGCGTGAT GTGGTTCGCG TGACGCTCGG CGGCAGCGCT CCACTGCCGG CCAGCAAGGC GAGGCTGGCC GAAGCGGCCC GCAACGAAGT CAGCGGCGTC GAGGTTGTCG ATCAGATAAG CCTCGCGCGC GGCGCACCCT CTCGTTTCGA CGCCACCGCA CTGCTGCTGG TGGATCAGAT CGGCAAGCTC AAGGAAGGCA AGATTACGCT GTCCGACACC AAGATCAGCC TGTCCGGCAT GGCGCGCGAT CTCGGCGGCC GCGAAGCCAT CGCCGCGGCG CTGAGGAATC TGCCGGAGGG CTATTCGGTC GCCGAGAACG ACATCAAGGC CCCGCCTTAC GTGTTCCAGG CCAACAAGGA TCCGGTTGCG TCGACGCTGA CGCTGACCGG CTACGTTCCC GACAACGCCG TCCATGCCGC GTTGGCGGAC ACCGCCGGCC AAAAATTCTT CAGCGAGAAG GTGGTCGACA ACCTCAAGGC CAGCATCGGC GCGCCGCAGG GCTTCGCAAA CGCCGTCAAA CCGGCGCTCG GCGCGCTGTC GCGGCTTTCG ACCGGGACCC TGATCGTGTC GGATCGCGAG GTGCGTCTGT CCGGCGATGC GCTGTTCGAG GCGGCGGTCA GCCAGATCCG AGCTGAACTG AACAAGGACA TGCCGCAAGG ATGGACCGTC AAGGCCGACC TCTCGGTCAA GCCGGCGGCG TCCCCGGTCG ATGCGACGGT CTGCCAGCAA TTGTTCAACG ACCTGCTCGG CAAGAGCACC GTGCGCTTCG ACTCCGCCAG CGCCAGCATC GACAAGGACT CCGCCGGCCT GCTCGACCGG CTGATCGAGA CCGCGATGCG TTGCCCCGGC GCCGCCATCG AGGTGGCGGG ACACACCGAC AGCGCCGGCG AGGCCGGCTC CAACCAGGCG CTTTCGGAAC GTCGGGCGCG GGCGGTGGTC GACTATATGG TGAGGGCCGG CCTGTCGCCG GAGCGTTTCC GGGCTTTCGG CTATGGCAGC AAGATCCCGC TCGAAGGGAA CGAGACCGAC GCTGGCAAGG CGAAAAATCG CCGCATCGAT TTCATGATCA GGTGA
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Protein sequence | MRGLFRSSGQ WWRGAIILIA LWAIAAWTTT PAVEADVAER SAAALKSTVL DKTRLTAAGR DIAFSADAFS EEGRRSAVAA VESVPGVRLV VDQTRLVPLA SPFVWSVERD VVRVTLGGSA PLPASKARLA EAARNEVSGV EVVDQISLAR GAPSRFDATA LLLVDQIGKL KEGKITLSDT KISLSGMARD LGGREAIAAA LRNLPEGYSV AENDIKAPPY VFQANKDPVA STLTLTGYVP DNAVHAALAD TAGQKFFSEK VVDNLKASIG APQGFANAVK PALGALSRLS TGTLIVSDRE VRLSGDALFE AAVSQIRAEL NKDMPQGWTV KADLSVKPAA SPVDATVCQQ LFNDLLGKST VRFDSASASI DKDSAGLLDR LIETAMRCPG AAIEVAGHTD SAGEAGSNQA LSERRARAVV DYMVRAGLSP ERFRAFGYGS KIPLEGNETD AGKAKNRRID FMIR
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