| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0882 |
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| Symbol | |
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| ID | 4021356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 994467 |
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| End bp | 995273 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637961072 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_568021 |
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| Protein GI | 91975362 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.254321 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.73895 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAAGG ATCTGTTTTC GCTGCAAGGG CGGGTCGCAG TGGTGACCGG CGGCTCGCGC
GGCATCGGCA AGATGATCGC GTCCGGTTTC CTCGCTTACG GCGCGGCGCG GGTCTACATC
ACCGCGCGCA AGGCCGCCGC CTGCGAGGCC ACCGCGGCGG AATTGACCGC GCAACATCCC
GGCGAATGCA TCGCGCTGCC GATCGACATC TCGACCATGG CGGGCATCGA GATGCTGGCG
AAGGAGATCG CGACGCGCGA ACCGAAGCTC GACATTCTCG TCAACAATGC CGGCGCCGCC
TGGGCCGCCG ACTTCGACGA ATTCCCGGAG AACGGCTGGG ACAAGGTGAT GGACCTCAAC
GTCAAGACGC CGTTCTTCCT GACCAAGGCG CTGGCCGGAC CGCTGCGCGC CGCGGCCACG
GCCGAGCGTC CCGGCAAGGT GATCAACATC GCCTCGATCG ACGGCATCTT CGTCAACCCG
CTCGAGACCT ATCCGTATGC CGCCTCGAAG GCCGGCCTGA TCCATCTGAC GCGGCGGTTG
GCGGTGCGGC TGATCAAGGA CCACATCGTG GTGACCGCGA TCGCGCCGGG ACCGTTTGCC
TCCGACATGA ACAAGGCCGC GCGCGACGAA GCCGACGCAG TGGCGAAGCG CGTGCCTTCG
GGCCGGATCG GAACCGACGA GGACATGGCG GGCACCGCGA TCTATCTGGC GTCGCGCGCC
GGCGACTACG TCGTCGGCGC CACCATCGCG GTCGACGGCG GCGTGGTCTA CGCCAATCCC
GGCTTCACGG GCGATAGCTG GGCGTGA
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| Protein sequence | MFKDLFSLQG RVAVVTGGSR GIGKMIASGF LAYGAARVYI TARKAAACEA TAAELTAQHP
GECIALPIDI STMAGIEMLA KEIATREPKL DILVNNAGAA WAADFDEFPE NGWDKVMDLN
VKTPFFLTKA LAGPLRAAAT AERPGKVINI ASIDGIFVNP LETYPYAASK AGLIHLTRRL
AVRLIKDHIV VTAIAPGPFA SDMNKAARDE ADAVAKRVPS GRIGTDEDMA GTAIYLASRA
GDYVVGATIA VDGGVVYANP GFTGDSWA
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