| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0880 |
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| Symbol | |
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| ID | 4021354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 990962 |
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| End bp | 992650 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637961070 |
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| Product | benzoyl-CoA-dihydrodiol lyase |
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| Protein accession | YP_568019 |
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| Protein GI | 91975360 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
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| TIGRFAM ID | [TIGR03222] benzoyl-CoA-dihydrodiol lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.436676 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.55485 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGGGG AGGATCGCGT TCTTGCCAAC GGAGCGAGCC GGATCGACTT TCAAACCGAT
CCGTCGCGCT ATCGGCACTG GACCCTCGCG GTCGACGGCG ACGTCGCGAC GCTCACCATG
GATGTCGACG AGAATGGCGG CCTGTTCGAG GGCTATCAGC TCAAGCTGAA TTCCTATGAC
CTCGGTGTCG ACATCGAGCT TGCCGACGCG ATGCAGCGGC TGCGTTTCGA GCACCCGCAG
GTGAAGGTCA TCCTGCTGCG CTCCGGCAAG AACCGGGTGT TCTGCGCCGG CGCCAACATC
CGGATGCTGG CCGGCGCGAC CCATGCCCAC AAGGTCAATT TCTGCAAATT CACCAACGAG
ACCCGCAACG GCTTCGAGGA TTCCTCCGAA CATTCCGGTC AGCGCACCAT CGCGGTGATC
AACGGCACCG CGGCCGGCGG CGGCTACGAA TTGGCGCTCG CCGCCGATCA CATCATCATG
GCCGACGACG GCGCCGCGGC CGTGGCACTG CCGGAAGTGC CGCTGCTGGC GGTGCTGCCC
GGCACCGGCG GGCTGACGCG GGTGGTCGAC AAGCGCAAGG TGCGGCGCGA CCGCGCCGAC
TTCTTCTGCA CCATCGAGGA AGGCATCAAG GGCAAGCGCG CAGTGCAGTG GCGCCTCGTC
GACGAGATCG CCCCGAACAG CAAGCTCGAA GCCAGGATCG CCGAGCGCGC GCAGCAATTC
GCCGCGTCGT CCTCCCGCAA TGGCGGCGGC AAGGGCATCG CGCTGACGCA GCTTCCGCGC
AGCTTCGACG AGGCCGGCGT GCGCTATCAA TTCGTCAGCG TCGACATCGA CCGCGCGGCG
CGGATCGCGA CGATCTCGAT CGCGGGCCCG CAATCCGGTC CTCCTGCCGA TATCGACGGT
CTGATCGCAC AAGGCGCGTC GACCTGGTCA CTGCAGGTCG CGCGCGAACT CGACGACGCC
ATCCTGCATC TGCGCATCAA CGAACTCGGC ATTGCGATGC TGGTGTTCAA GTCGCACGGC
GACAGCGATC TGGTGCTGGC GCACGACGCC TTCCTGGAAG CCAACAAGGC GCATTGGCTG
GTGAACGAGA TCCGGCACTA CTGGAAGCGC GTGTTGAAGC GGATCGACGT CACCTCGCGC
ACGCTGGTGA CGCTGGTCGA GCCGGGCTCG TGCTTCGCCG GCACGCTGGC CGAACTCGTA
TTCGCCGCCG ACCGCTCCTA CATGCTGATC GGCGCCCGCC AGGGCGACAA CCGCGCCGCG
CCGCAGTTGA CGCTGAGCGC GATGAATTTC GGTCCCTATC CGATGAGTCA CGGCCTGACG
CGGCTGCAGT CGCGCTTCCA GGCCGATGCC GATGAGCTTG TCCAGGCGCA GGCGAACATC
GGCGAGCCGC TGGATGCCGA GGCCGCCGAC GAACTCGGCC TCGTCACCTT CGCGCTCGAC
GACATCGACT GGGACGACGA GGTTCGCGTG TTTCTTGAGG AGCGCGCCAG CTTCTCGCCC
GACAGCCTCA CCGGCATGGA AGCCAATCTG CGCTTCGCCG GCCCTGAGAC GATGGAATCC
AAGATCTTCT CGCGCCTCAC CGCGTGGCAG AACTGGATCT TCCAGCGCCC CAACGCCGTC
GGCGAAGACG GCGCGCTCCG CCGCTACGGC ACCGGCCAGA AGGCGCAATT CGACATGACG
CGGGTGTGA
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| Protein sequence | MAGEDRVLAN GASRIDFQTD PSRYRHWTLA VDGDVATLTM DVDENGGLFE GYQLKLNSYD
LGVDIELADA MQRLRFEHPQ VKVILLRSGK NRVFCAGANI RMLAGATHAH KVNFCKFTNE
TRNGFEDSSE HSGQRTIAVI NGTAAGGGYE LALAADHIIM ADDGAAAVAL PEVPLLAVLP
GTGGLTRVVD KRKVRRDRAD FFCTIEEGIK GKRAVQWRLV DEIAPNSKLE ARIAERAQQF
AASSSRNGGG KGIALTQLPR SFDEAGVRYQ FVSVDIDRAA RIATISIAGP QSGPPADIDG
LIAQGASTWS LQVARELDDA ILHLRINELG IAMLVFKSHG DSDLVLAHDA FLEANKAHWL
VNEIRHYWKR VLKRIDVTSR TLVTLVEPGS CFAGTLAELV FAADRSYMLI GARQGDNRAA
PQLTLSAMNF GPYPMSHGLT RLQSRFQADA DELVQAQANI GEPLDAEAAD ELGLVTFALD
DIDWDDEVRV FLEERASFSP DSLTGMEANL RFAGPETMES KIFSRLTAWQ NWIFQRPNAV
GEDGALRRYG TGQKAQFDMT RV
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