| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0876 |
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| Symbol | gltD |
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| ID | 4021350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 985894 |
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| End bp | 987348 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637961066 |
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| Product | glutamate synthase subunit beta |
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| Protein accession | YP_568015 |
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| Protein GI | 162138291 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.490935 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAAGA TCACGGGATT TCTGGAAATC GAGCGGCACG ATCGCGTCTA TGCGCCGGTC
GCCGAACGGG TCAGCAACTA CAAGGAATTC GTCGTTCCGC TCAGCGAGAA GGACACCCGC
GATCAGGCTG CGCGCTGCAT GAATTGCGGC ATTCCCTATT GCCACGGCAC CGGCTCGGCG
CAGCCGGGCG CGCCGGGCTG CCCGGTCAAC AACCAGATCC CCGACTGGAA CGATCTGGTC
TATCAGTCCA ATTGGCAGGA AGCCTCGCGC AACCTGCACT CGACCAACAA CTTCCCGGAA
TTCACCGGCC GGATTTGTCC CGCGCCGTGC GAGGCGTCGT GCACGCTGAA CATCGACGAC
AACCCGGTCA CGATCAAAAC CATCGAATGC GCGATCGTCG ACCGCGCCTG GGAGAACGGC
TGGCTCGCGC CCGAGATCGC CTCGGTCAAG ACCGGCCAGA GCGTTGCGGT GGTCGGCTCC
GGCCCCGCGG GTCTGGCTTG CGCGCAGCAG CTCGCGCGCG CCGGCCACGA CGTCCATGTC
TATGAGAAGC TCGCCAAGGC CGGCGGCCTG CTGCGCTACG GCATTCCCGA CTTCAAGATG
GAGAAGCATC TGATCGACCG CCGCGTCGCG CAGATGGAAG CCGAGGGCGT CACCTTCCAC
TACAATTCGC CGGTCGGCGG CAGCGCCGCG GGCGCGGTCG ATCCGGCCGA ACTGCTCAAG
ACCTATGACG CCGTCGCGCT GACCGGCGGC GCCGAGGCGC CGCGCGATCT GCCGATCCCG
GGCCGCGACC TTGCCGGCAT CCATTTCGCG ATGGACTTCC TCACCCAGCA GAACCGCCGC
GTCTCCGGCG AAGCGGTGAG CGGCGATGAT ATCCTGGCCA CCGGCAAGAA CGTGGTGGTG
ATCGGCGGCG GCGACACCGG CTCGGACTGC ATCGGCACGT CGATCCGTCA GGGCGCGAAG
TCGGTGACCC AGATCGAGAT CATGACCGCG CCGCCGGAGA AGGAAGACAA GGCTCTCACC
TGGCCGAACT GGCCGATGAA GATGCGCACC TCGTCGAGCC AGGCCGAAGG CGCGGACCGC
GAATTCGCGG TGCTGACGCA GAGCTTCGCG GGCGAAAACG GCGCGGTGAA GCAGCTCAAT
TGCGTCCGCG TCGACGCCAA GTTCCAGCCG ATCCCCGGCA CCGAATTCGT GCTGGAAGCC
GACCTCGTGC TGCTGGCGAT GGGCTTCGTC TCGCCGGTGA AAGAGGGGCT GCTCGCCTCG
CTCGGCGTCG CGCTGGACCC GCGCGGCAAT GTCAGCGCCG ACCTGTCCCA CTTCACCACC
TCGATCGACA AGGTGTTCGC CGCCGGCGAC ATGCGCCGCG GTCAATCGCT GGTGGTCTGG
GCGATTCGCG AAGGCCGCCT CTGCGCCCGG GCGATCGATC AGTTTCTGAT GGGCAGCACG
ACGCTGCCGA AGTAA
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| Protein sequence | MGKITGFLEI ERHDRVYAPV AERVSNYKEF VVPLSEKDTR DQAARCMNCG IPYCHGTGSA
QPGAPGCPVN NQIPDWNDLV YQSNWQEASR NLHSTNNFPE FTGRICPAPC EASCTLNIDD
NPVTIKTIEC AIVDRAWENG WLAPEIASVK TGQSVAVVGS GPAGLACAQQ LARAGHDVHV
YEKLAKAGGL LRYGIPDFKM EKHLIDRRVA QMEAEGVTFH YNSPVGGSAA GAVDPAELLK
TYDAVALTGG AEAPRDLPIP GRDLAGIHFA MDFLTQQNRR VSGEAVSGDD ILATGKNVVV
IGGGDTGSDC IGTSIRQGAK SVTQIEIMTA PPEKEDKALT WPNWPMKMRT SSSQAEGADR
EFAVLTQSFA GENGAVKQLN CVRVDAKFQP IPGTEFVLEA DLVLLAMGFV SPVKEGLLAS
LGVALDPRGN VSADLSHFTT SIDKVFAAGD MRRGQSLVVW AIREGRLCAR AIDQFLMGST
TLPK
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