| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0875 |
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| Symbol | |
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| ID | 4021349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 980981 |
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| End bp | 985729 |
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| Gene Length | 4749 bp |
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| Protein Length | 1582 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637961065 |
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| Product | glutamate synthase ferredoxin subunit |
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| Protein accession | YP_568014 |
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| Protein GI | 91975355 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0619471 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.609882 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGGT CTGGGTTTGA GCGCGACAAC ACGGCTGCCG AAGCGCTGAC GGTGGACCCG
GCTGCGAAAG CGAATGCGAC TTTGGTCGGG CAGGATCAGC GCGAGCACGA TTGGCGGCCG
CCGGCTGAGG GCCTGTACGA CCTGTCGCGC GAGAAAGACG CCTGCGGCGT CGGTTTCATC
GCCAGCATCA AGGGCGTGAA GTCGCATCAG ATCGTCGCCG ATGCGATCCG GATTCTGTGC
AACCTCGAGC ACCGCGGCGC GGTCGGCGCT GACCCGCGCG CCGGCGACGG CGCCGGCATT
CTGGTGCAGA TCCCGCACGC CTTCTTCAGC CGCAAAGTCT CGGAACTCGG CTTCACGCTG
CCGGCGCCCG GTGAATACGC CGTCGGCGCC CTGTTCATGC CGCGCGACAG CTCGTGGCGG
AAAGTGATTC AGAGCATCGT CGCCGACCAG ATCAAGGCCG AGGGCCTGAC CCTGCTCGGC
TGGCGCGACG TGCCGACCGA CAATTCCTCT CTGGGTGAGA CCGTCAAGCC GACCGAGCCC
GCCAACATGC AGGTGTTCGT CGGTCGCGGC AGCGTGATCA AGACCGAGGA CGATTTCGAG
CGTCAGCTCC TGATTGTGCG CAAGTCGATC TCGAACGCGA TCTATCAGCG CCGCGACCGC
GGCTTCGCCG GCTACTACCC GGTGTCGCTG TCGTGCCGGA CCGTCATCTA CAAGGGTATG
TTCCTGGCCG ATCAGCTCGG CAAGTATTAC CCCGATCTCA GCGAGCCGGA TTTCGAAAGC
GCGCTGGCGC TGGTGCATCA GCGGTTCTCG ACCAACACCT TCCCGACCTG GTCGCTGGCG
CATCCCTACC GGATGGTCGC GCATAACGGC GAGATCAACA CCCTGCGCGG CAACGTCAAC
TGGATGGCGG CGCGGCAGGC TTCGGTGCAT TCCAAGCTGT ACGGCAAGGA CATCAGCCGG
CTGTGGCCGA TCTCCTATGA GGGCCAGTCC GACACCGCCT GTTTCGACAA CGCGCTCGAA
TTCCTGGTGC GCGGCGGCTA CTCGCTGCCG CATGCGGTGA TGATGATGAT TCCGGAGGCG
TGGGCCGGCA ATCCGTTGAT GGATGAGCAG CGCCGCGCCT TCTACGAATA TCACGCCGCG
CTGATGGAAC CGTGGGACGG CCCGGCGGCG CTCGCCTTCA CCGACGGCCG CCAGATCGGC
GCCACGCTCG ACCGCAACGG TCTGCGTCCG GCGCGCTATC TGGTGACCAA GGACGACCGC
ATCGTGATGG CGTCCGAAAT GGGCGTGCTG AAGATTCCGG AAGATCAGAT CGTCACCAAG
TGGCGGCTGC AGCCCGGCAA GATGCTGCTG GTCGACCTCG TCGAGGGTCG CCTGATCCCC
GACGACGAGA TCAAGGCGCA GCTCGCCGCC AGCCAGCCCT ATCGCGAATG GCTCGGCCGC
ACCCAGATCG TGCTCGAGGA GCTCAAGGAC GCGCCGGTCA AGGGCCAGCG CTCCAATCTG
CCGCTGCTCG ATCGCCAGCA GGCGTTCGGC TACACTCAGG AGGACATCTC GATCCTGATG
ACGCCGATGG CGTCGACGGG CGAGGAGGCC TCGGGCTCGA TGGGCAACGA CACGCCGCTG
TCGGCGCTGT CCGACAAGCC GAAGCCGCTG TTCACCTACT TCAAGCAGAA CTTCGCGCAG
GTCACCAACC CGCCGATCGA TCCGATCCGC GAAGAGCTGG TGATGAGCCT GGTCTCGATC
ATCGGCCCGC GGCCGAACCT GTTCGACACC CACGGCCTCG CCGGCACCAA GCGGCTCGAA
GTGCGCCAGC CGATCCTGAC CGACGGCGAC CTCGAGAAGA TCCGCTCGAT TTCCGAGATC
GGCGATCCGC ATTTCAAGTC GCGCACACTC GACACCACCT TCCACGCCGG GCTCGGCGCC
GCCGGCCTCG AGCAGGTGCT GGAGGATCTG TCGGCGCGCG CCGAAGCCGC GGTGCGTGAC
GGCGTCAACA TCATCATCCT GAGCGACCGC GCCGCCGGCA GCGATCGGAT CCCGATCCCG
TCGCTGCTCG CCTGCGCCGC CGTGCATCAT CATCTGATCC GGGTGGGCCT GCGCACCTCG
GTCGGTCTCG TGGTCGAGTC GGGCGAGCCG CGCGAGGTGC ATCACTTCGC TTGTCTCGCC
GGCTACGGCG CCGAGGCGAT CAACCCGTAT CTCGCCTTCG AGACCATCAT CGCGCTCAAG
GACAAGCTGC CGGCGAAGCT CGACGACTAC GAGATCGTCA AGCGCTACAT CAAGTCGATC
GGCAAGGGCC TGCTGAAGGT GATGTCCAAG ATGGGCATCT CGACCTATCA GTCGTATTGC
GGCGCGCAGA TTTTCGACGC CGTCGGGCTC AAGGCCGATT TCATCGCCAA GTACTTCGCC
GGCACGCATT CGCAGATCGA GGGCGTGGGG CTCGCGCAGA TCGCCGAGGA AACCGTGCGC
CGTCATCACG ACGCGTTCGG CGGGGCGATG GTCTACAAGA CCGCGCTCGA TGTCGGCGGC
GAATACGCCT ACCGCTCACG CGGCGAGGAC CACGCCTGGA CCGCGGATTC GGTGTCGACA
CTGCAGCACG CGGTGCGCGG CAATTCCGCC GAGCGCTATC GCGCCTTCGC CCGCATCCTC
AACGAGCAGC AGGAGCGTCT GTTGACGCTG CGCGGGCTGT TCAAGATCAA GGATGCCGGG
GCCGAGGGCC GCAAGCCGGT GCCGCTCGCC GAAGTCGAGC CGGCCGCCGA GATCGTCAAG
CGGTTCTCGA CCGGTGCGAT GAGCTTCGGC TCGATCTCGC GCGAGGCGCA TACCACGCTG
GCGATCGCCA TGAACCGGAT CGGCGGCAAG TCGAATACCG GCGAGGGCGG CGAGGAAGCC
GACCGCTTCA AGCCGATGGC CAATGGTGAT TCGATGCGCT CGGCGATCAA GCAGGTCGCC
TCGGGACGGT TCGGCGTCAC CACGGAATAT CTCGTCAATT CCGACATGAT GCAGATCAAG
ATGGCGCAGG GCGCCAAGCC GGGCGAGGGC GGACAGCTGC CCGGCCACAA GGTCGACGCG
ACCATCGCGG CGGTGCGCCA CTCGACCCCG GGCGTCGGCC TGATCTCGCC GCCGCCGCAT
CACGACATCT ACTCGATCGA GGATCTGGCG CAGCTGATCT ACGATCTGAA GAACGTCAAT
CCGACGAGCG CGGTCTCGGT CAAGCTGGTG TCGGAAATCG GCGTCGGCAC CGTCGCCGCC
GGCGTCGCGA AAGCGCGCGC CGACCACGTC ACCATCGCGG GCTTCGAGGG CGGCACCGGC
GCTTCGCCGC TGACCTCGAT CAAGCACGCC GGTTCGCCGT GGGAAATCGG CCTCGCTGAA
ACCCATCAGA CCCTGGTGCG TGAGCGGCTG CGCTCCCGCA TCGTGGTGCA GGTCGATGGC
GGCTTCCGCA CCGGGCGCGA CGTCGTGATA GGCGCGCTGC TCGGCGCCGA CGAGTTCGGC
TTCGCCACCG CGCCGCTGAT CGCCGCCGGC TGCATCATGA TGCGCAAGTG CCATCTCAAC
ACCTGCCCGG TCGGCGTCGC CACCCAGGAC CCGGTGCTGC GCAAGCGCTT CACCGGCCAG
CCCGAGCACG TCATCAACTA CTTCTTCTTC GTCGCCGAGG AAGTCCGCGA ACTGATGGCG
AGCCTCGGCT ATCGCAGCTT CAACGAGATG GTCGGCCAGT CGCAGATGCT CGACCAGCAG
GCGCTGGTCG CGCATTGGAA GGCCAAGGGC CTCGACTTCT CCAAGCTGTT CCACAAGCAG
AAGGCCGAAG CCGGCCAGAC GCTGTATCAC TCGGAGATCC AGGACCATCA CCTCGACAAC
GTGCTCGATC GCACGCTGAT CGCGAAGGCG CAGGCGGCGA TCGACCGCGG CGCGCCGGTG
AAGTTCGAGG TCGAGATCAA CAACACCAAC CGCTCGGCCG GCGCGATGCT GGCCGGCACC
GTCGCCAAGC ATTACGGCCA TGCCGGCCTG CCGCACGACA CCATCCAGGT GCAGCTGAAG
GGCACCGCGG GGCAGGCGTT CGGCGCCTGG CTCACGCGCG GCATCACCTT CGACCTCGAA
GGCGAAGGCA ACGACTATGT CGGCAAGGGC CTGTCCGGCG GCAAGATCAT CGTGCGGCCG
CCGGCGAATT CCGGCATCGT GCCGGAAGAG TCGATCATCG TCGGCAACAC CGTGATGTAC
GGCGCGATCG AGGGCGAGTG CTACTTCCGC GGCATCGCCG GTGAGCGCTT CGCTGTCCGC
AATTCGGGTG CGGTGGCCGT CGTCGAGGGC GCCGGCGACC ATTGCTGCGA ATACATGACC
GGCGGCATCG TCGTGGTGCT CGGCAAGACC GGCCGCAACT TCGCAGCCGG CATGTCGGGC
GGCGTCGCTT ATGTGCTGGA CGAGGACGGT TCGTTCCCGA AACTGTGCAA TCTGGCGATG
GTCGAACTCG AGCCGGTGCT CTCGGAAGAG CTGATCAACG CCGGCGCGTT CCACCAGTCG
GGCGATCTCG AGGCGCATGG CCGGGTCGAC GTGTTCGCCG ATTTGCTCGG CTCCGACATC
GAGCGGCTGC ACGTGCTGAT CTCGCGCCAC GCCAAATATT CCGGCTCGAA GCGCGCCGCC
GAGATCCTCG CGAACTGGAA CGACTACCTG CCGAAGTTCC GCAAGGTGAT GCCGGTCGAG
TACCGCCGCG CGTTGCGCGA GCTGAAAGCA CGGCAGGCCG AGGAGCCGAA GATCGCGATC
GGAGCGTAA
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| Protein sequence | MSGSGFERDN TAAEALTVDP AAKANATLVG QDQREHDWRP PAEGLYDLSR EKDACGVGFI
ASIKGVKSHQ IVADAIRILC NLEHRGAVGA DPRAGDGAGI LVQIPHAFFS RKVSELGFTL
PAPGEYAVGA LFMPRDSSWR KVIQSIVADQ IKAEGLTLLG WRDVPTDNSS LGETVKPTEP
ANMQVFVGRG SVIKTEDDFE RQLLIVRKSI SNAIYQRRDR GFAGYYPVSL SCRTVIYKGM
FLADQLGKYY PDLSEPDFES ALALVHQRFS TNTFPTWSLA HPYRMVAHNG EINTLRGNVN
WMAARQASVH SKLYGKDISR LWPISYEGQS DTACFDNALE FLVRGGYSLP HAVMMMIPEA
WAGNPLMDEQ RRAFYEYHAA LMEPWDGPAA LAFTDGRQIG ATLDRNGLRP ARYLVTKDDR
IVMASEMGVL KIPEDQIVTK WRLQPGKMLL VDLVEGRLIP DDEIKAQLAA SQPYREWLGR
TQIVLEELKD APVKGQRSNL PLLDRQQAFG YTQEDISILM TPMASTGEEA SGSMGNDTPL
SALSDKPKPL FTYFKQNFAQ VTNPPIDPIR EELVMSLVSI IGPRPNLFDT HGLAGTKRLE
VRQPILTDGD LEKIRSISEI GDPHFKSRTL DTTFHAGLGA AGLEQVLEDL SARAEAAVRD
GVNIIILSDR AAGSDRIPIP SLLACAAVHH HLIRVGLRTS VGLVVESGEP REVHHFACLA
GYGAEAINPY LAFETIIALK DKLPAKLDDY EIVKRYIKSI GKGLLKVMSK MGISTYQSYC
GAQIFDAVGL KADFIAKYFA GTHSQIEGVG LAQIAEETVR RHHDAFGGAM VYKTALDVGG
EYAYRSRGED HAWTADSVST LQHAVRGNSA ERYRAFARIL NEQQERLLTL RGLFKIKDAG
AEGRKPVPLA EVEPAAEIVK RFSTGAMSFG SISREAHTTL AIAMNRIGGK SNTGEGGEEA
DRFKPMANGD SMRSAIKQVA SGRFGVTTEY LVNSDMMQIK MAQGAKPGEG GQLPGHKVDA
TIAAVRHSTP GVGLISPPPH HDIYSIEDLA QLIYDLKNVN PTSAVSVKLV SEIGVGTVAA
GVAKARADHV TIAGFEGGTG ASPLTSIKHA GSPWEIGLAE THQTLVRERL RSRIVVQVDG
GFRTGRDVVI GALLGADEFG FATAPLIAAG CIMMRKCHLN TCPVGVATQD PVLRKRFTGQ
PEHVINYFFF VAEEVRELMA SLGYRSFNEM VGQSQMLDQQ ALVAHWKAKG LDFSKLFHKQ
KAEAGQTLYH SEIQDHHLDN VLDRTLIAKA QAAIDRGAPV KFEVEINNTN RSAGAMLAGT
VAKHYGHAGL PHDTIQVQLK GTAGQAFGAW LTRGITFDLE GEGNDYVGKG LSGGKIIVRP
PANSGIVPEE SIIVGNTVMY GAIEGECYFR GIAGERFAVR NSGAVAVVEG AGDHCCEYMT
GGIVVVLGKT GRNFAAGMSG GVAYVLDEDG SFPKLCNLAM VELEPVLSEE LINAGAFHQS
GDLEAHGRVD VFADLLGSDI ERLHVLISRH AKYSGSKRAA EILANWNDYL PKFRKVMPVE
YRRALRELKA RQAEEPKIAI GA
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