Gene RPD_0870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0870 
Symbol 
ID4021344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp976039 
End bp976911 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content64% 
IMG OID637961060 
ProductUTP-glucose-1-phosphate uridylyltransferase 
Protein accessionYP_568009 
Protein GI91975350 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1210] UDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01099] UTP-glucose-1-phosphate uridylyltransferase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.59978 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCC GTAAAGCCGT GTTTCCGGTC GCCGGCCTCG GCACCCGCGT CCTTCCCGCC 
ACCAAGGCGA TGCCGAAGGA GATGCTCACA ATCGTCGACA GACCGCTGAT CCAGTATGTC
GTCGATGAGG CCAAGGAAGC CGGCATCGAA CACTTCATCT TCGTCACCGG CCGCAACAAG
GGCATGATCG AGGATCATTT CGACCGCCAG TTCGAACTCG ACGTGACCCT GGAGAAGCGC
AACAAGACGT CGGAAATGGC AATCCTGGCG CGCGACCAGC CCGAGGCCGG CGCGATGAGC
TTCACCCGCC AGCAGGCGCC GCACGGTCTC GGCCACGCCG TCTGGTGCGC CCGCGACATC
GTCGGCAACG AGCCGTTCGC GGTGGTGCTG CCGGACGAGC TGGTGCTCAA CTCGCCCGGC
TGCCTCAAGC AGATGATCCA GGCCGCGGAA CGACTCGGCG ACAAGGCCAA TGTCATCGCG
GTCGAGGAAG TGCCGGCCGA CATGACCCAT CAATACGGCA TCTGCGGCGT CGGCAAGCGC
GACGGCAACA TCTTCGAGAT CGACGGCATG ATCGAGAAGC CGAAGCCCGG CACCGCGCCG
TCGAACCTGT CGATCACCGG CCGCTACATC CTGCAGCCCG AGATCTTCAA GATTCTCGCG
ACCCAGGAGC GCGGCGCCGG CAACGAGATC CAGCTCACCG ACGCCATGAT CGGACTGTCC
GCGACGCAGA AATTCTACGG CGTCGAATTC GAGGGCGAGC GTCACGATTG CGGCTCGAAG
GCCGGCTTCC TCCGCGCCAA CATCGCGTTC GCGATGCGAC GCGACGATCT GCGCGACGGG
CTGCGCGCCG ACATGCAGCG ATATCTCGCC TGA
 
Protein sequence
MKIRKAVFPV AGLGTRVLPA TKAMPKEMLT IVDRPLIQYV VDEAKEAGIE HFIFVTGRNK 
GMIEDHFDRQ FELDVTLEKR NKTSEMAILA RDQPEAGAMS FTRQQAPHGL GHAVWCARDI
VGNEPFAVVL PDELVLNSPG CLKQMIQAAE RLGDKANVIA VEEVPADMTH QYGICGVGKR
DGNIFEIDGM IEKPKPGTAP SNLSITGRYI LQPEIFKILA TQERGAGNEI QLTDAMIGLS
ATQKFYGVEF EGERHDCGSK AGFLRANIAF AMRRDDLRDG LRADMQRYLA