| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0858 |
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| Symbol | |
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| ID | 4021332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 961351 |
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| End bp | 963441 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637961048 |
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| Product | peptidyl-dipeptidase Dcp |
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| Protein accession | YP_567997 |
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| Protein GI | 91975338 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0339] Zn-dependent oligopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.556421 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAAA GCTCCGGACC GAATGCCGCA GCCCCGAGCA CCGGCAATCC GCTGTTGCAG
GCCTGGACCA CCCCGTTCGA AACCCCGCCA TTCGCCGAGA TCGCGCCGGA GCATTTCCTG
CCGGCGTTCG AGCAGGCGTT CGCCGACCAT GCCGCCGAGA TCGCCGCGAT CACCCACGAT
CCGACCGAAC CGGACTTCGA CAACACCATC ACCGCGCTGG AGCGCTCCGG CAAGCTGCTC
AACAGGGTGG CGGCGGTGTT CTACGACCTG GTCTCGGCGC ACTCCAATCC GGCGCTTCTG
GAGATCGACA AGGACGTGTC GCTGCGGATG GCGCGGCACT GGAATCCGAT CATGATGAAC
GCCGTGCTGT TCGGCCGCAT CGCCGCGCTG CGCGACAAGC GCGCCGAGCT GAAGCTGACC
TCCGAGCAGC AGCGGCTGCT GGAGCGCACC TATACCCGCT TCCATCGCTC CGGTGCCGGC
CTCGACGACG CCGCCAAGGC GCGGATGGCC GAGATCAACG AGCGGCTGGC GCAGCTCGGC
ACCAATTTCG GCCATCATCT GCTCGGCGAC GAGCAGGACT GGTTCATGGA ATTGGGCGAA
AGCGACACCG ACGGCCTGCC CGCGAGCTAC GTCGCCGCCG CCCGTGCCGC GGCGAAGGAA
CGCGGGATGC CCGGCAAGGC GGTGGTGACG CTGTCGCGCT CCTCGGTCGA GCCGTTCCTG
AAGAGTTCGA GCCGCCGCGA CCTGCGCGAG AAGGTCTATC GCGCTTTCAT CGCCCGCGGC
GACAACGGCA ACGCCAACGA CAACAACGCG CTGATCGGCG AGATCCTCAG TCTGCGCGAG
GAGACCGCGA AGCTGCTCGG CTACCCGACC TACGCGGCCT ACCGGCTCGA GGATTCGATG
GCCAAGACGC CGGAAGCGGT GCGCGGCCTG CTGGAGCGGG TGTGGAAACC GGCGCGCGCC
CGCGCGATGG CCGACCGCGA CGCGCTGCAG GAGCTGGTCG CCGAGGACGG CGGCAATTTC
AAGCTGGCGC CGTGGGACTG GCGCTATTAC GCCGAGAGGC TGCGGCAGCG CCGCGCCAAT
TTCGACGATT CCGCGATCAA GCCGTATCTC GCGCTCGACA ACATGATCGC CGCCGCGTTC
GACACCGCGA CGCGGCTGTT CGGCGTCAGC TTCGCCGAGC GCAACGACGT CCCGGTGTGG
CACCCCGACG TCCGGGTCTG GGAGGTCAAG GATGCCGACG GCGCGCATCG CGGGCTGTTC
TACGGCGATT ACTACGCCCG GCCGTCGAAG CGCTCCGGCG CCTGGATGAC CTCGCTGCGC
GACCAGCAGA AGCTCGACGG CGCGGTGGCG CCGCTGATCA TCAATGTCTG CAACTTCGCC
AAGGGCGCCG ACGGCGAACC GTCGCTGCTG TCGCCCGATG ACGCCCGCAC GCTGTTCCAC
GAATTCGGCC ACGGCCTGCA CGGGATGCTG TCGGACGTGG TCTACCCGTC GCTGTCCGGC
ACCAGCGTGT TCACCGATTT CGTCGAACTG CCGTCGCAGC TCTATGAACA TTGGCAGGAG
CAGCCGCAGG TTCTGCAGCA GTTCGCCCGG CACTACCAGA CCGGCGAGCC GCTGCCCGAC
GATCTGTTGA GGCGCTTCAT CGCCGCGCGC AAATTCAACC AGGGCTTCGC CACGGTGGAA
TTCGTGTCCT CGGCGCTGCT CGACCTCGAG TTCCACACCC AGCCGGCCTC CGCGATCGGC
GAGGTCCGCG CCTTCGAACG CCGGGAGCTC GAGAAGATCG GGATGCCGGA GGAGATCGCG
CTGCGCCACC GGCCGCCACA GTTCGCCCAC ATCTTCACCG GCGATCATTA CGCCTCGGGT
TACTACAGTT ATATGTGGTC CGAGGTGATG GACGCCGACG CGTTCGGCGC GTTCGAGGAG
GCCGGCGACA TCTACGATCC GCAAGTCGCC AAGAGGCTGC GCGACGACAT CTACGCCTCG
GGCGGCTCGC GCGATCCGGA GGAGGCCTAT ATCGCCTTCC GCGGCCGCGC GCCGGAGCCC
GATGCGCTGC TGCGCCGGCG TGGCCTGCTC GAAACCCCGG AGGCCGCGTA A
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| Protein sequence | MSESSGPNAA APSTGNPLLQ AWTTPFETPP FAEIAPEHFL PAFEQAFADH AAEIAAITHD
PTEPDFDNTI TALERSGKLL NRVAAVFYDL VSAHSNPALL EIDKDVSLRM ARHWNPIMMN
AVLFGRIAAL RDKRAELKLT SEQQRLLERT YTRFHRSGAG LDDAAKARMA EINERLAQLG
TNFGHHLLGD EQDWFMELGE SDTDGLPASY VAAARAAAKE RGMPGKAVVT LSRSSVEPFL
KSSSRRDLRE KVYRAFIARG DNGNANDNNA LIGEILSLRE ETAKLLGYPT YAAYRLEDSM
AKTPEAVRGL LERVWKPARA RAMADRDALQ ELVAEDGGNF KLAPWDWRYY AERLRQRRAN
FDDSAIKPYL ALDNMIAAAF DTATRLFGVS FAERNDVPVW HPDVRVWEVK DADGAHRGLF
YGDYYARPSK RSGAWMTSLR DQQKLDGAVA PLIINVCNFA KGADGEPSLL SPDDARTLFH
EFGHGLHGML SDVVYPSLSG TSVFTDFVEL PSQLYEHWQE QPQVLQQFAR HYQTGEPLPD
DLLRRFIAAR KFNQGFATVE FVSSALLDLE FHTQPASAIG EVRAFERREL EKIGMPEEIA
LRHRPPQFAH IFTGDHYASG YYSYMWSEVM DADAFGAFEE AGDIYDPQVA KRLRDDIYAS
GGSRDPEEAY IAFRGRAPEP DALLRRRGLL ETPEAA
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