| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0856 |
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| Symbol | |
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| ID | 4021330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 958984 |
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| End bp | 960126 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637961046 |
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| Product | ornithine decarboxylase |
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| Protein accession | YP_567995 |
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| Protein GI | 91975336 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.310254 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAC GTATTCGGGA TTTTCTGCGC GACCGCCGTA ACAATGGTCT GGATGTCGAG
CCCTGCCTCG TCGTCGATCT CGAAGTCGTG CGCGACAATT TCACCAGCTT CGCCCGGGCG
CTGCCGGACA GCCGCGTGTT CTATGCTGTC AAGGCCAACC CGGCGCCGGA AGTGCTGTCG
CTGCTGGCGT CGCTCGGCTC GTGCTTCGAC TGCGCCTCGG TGCAGGAGAT CCAGATGGCG
CTGGCTGCCG GTGCGACCCC GGACCGCATC TCCTATGGCA ACACCATCAA GAAGGAACGC
GACATCGCGC GCTCCTATGA GCTCGGCATT CGCCTGTTCT CGGTCGACTG CACCGCCGAG
GTGGAGAAGA TCGCGCGCTC GGCGCCGGGT TCGAAGGTGT TCTGCCGCAT CCTGTACGAT
TGCGCCGGCG CCGAGTGGCC GCTGTCGCGC AAGTTCGGCT GCGATCCGGA GATGGCGGTC
GATGTGCTCG ACGCGGCGAA GCGCCTCGGC CTGGAAGCCT ATGGCATCTC GTTCCATGTC
GGCTCGCAGC AGCGCAAGGT GAAGGCGTGG GACCGTGCGT TGGCGATGGC CGCGACCGTG
TTCCGCGACT GCGCCGAGCG CGGCATCAGC CTGTCGATGG TCAATATGGG TGGTGGCTTC
CCGACCAAAT ATCTGAAGGA AGTGCCGCCG GTGGTGCAGT ACGGCCGCTC GATCTTCCGG
GCGCTGCGCA AGCACTTCGG CAACCAGATC CCGGAGACCA TCATCGAGCC GGGTCGCGGC
ATGGTCGGCA ATGCCGGCGT GATCGAGACC GAAGTCGTTC TGATTTCGAA CAAGAGCGAC
AAGGACGAGA CGCGCTGGGT CTATCTCGAC ATCGGCAAGT TCGGCGGTCT CGCCGAGACG
ATGGACGAGT CGATCCGCTA CGCGATCCGC TCGCGCCATG ACGGCGCCGA GATGACGCCC
TGCGTGCTCG CCGGCCCGAC CTGCGATTCG GCCGACGTGC TGTACGAGAA GATGCCGTAC
CCGCTGCCGG TGACGCTCGA GATCGGCGAC AAGCTGCTGA TCGAAGGCAC CGGGGCGTAT
ACGTCGACTT ACTCGGCTGT GGCCTTCAAC GGCTTCCCGC CGCTGCGGAC CTACCACATC
TAA
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| Protein sequence | MTERIRDFLR DRRNNGLDVE PCLVVDLEVV RDNFTSFARA LPDSRVFYAV KANPAPEVLS
LLASLGSCFD CASVQEIQMA LAAGATPDRI SYGNTIKKER DIARSYELGI RLFSVDCTAE
VEKIARSAPG SKVFCRILYD CAGAEWPLSR KFGCDPEMAV DVLDAAKRLG LEAYGISFHV
GSQQRKVKAW DRALAMAATV FRDCAERGIS LSMVNMGGGF PTKYLKEVPP VVQYGRSIFR
ALRKHFGNQI PETIIEPGRG MVGNAGVIET EVVLISNKSD KDETRWVYLD IGKFGGLAET
MDESIRYAIR SRHDGAEMTP CVLAGPTCDS ADVLYEKMPY PLPVTLEIGD KLLIEGTGAY
TSTYSAVAFN GFPPLRTYHI
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