| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0850 |
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| Symbol | |
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| ID | 4021324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 954761 |
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| End bp | 956188 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637961040 |
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| Product | homospermidine synthase |
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| Protein accession | YP_567989 |
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| Protein GI | 91975330 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG5310] Homospermidine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.369039 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCGCAC ATCCCGTCCA CGCACGCATC GATGGCCCCA TCGTGATGAT CGGCTTCGGC
TCGATCGGCA AGGGCGCGCT GCCCTTGATC GAGCGTCACT TCGCGTACGA CAAGAAGCGC
TTCGTGATCA TCGATCCGCA TGCCGACGAC GAACTGGCCA GGAAGCACGG CGTCCGCTTC
ATCAAGCAGG CGGTCACCCG CGACAACTAC CACGAGTTGC TGATCCCGCT GCTCACCGAA
GGCGGCGGCC AGGGGTTCTG CGTCAACCTG TCGGTCGACA CCGGCTCGGT CGACCTGATG
ACGATGTGCC GTGAGATCGG CGCGCTGTAC ATCGACACCG TCGTCGAGCC CTGGCTCGGC
TTCTATTTCG ACAAGAGCGC CGGCCCGGAG AAGCGCTCCA ACTACGCACT GCGCGAGACG
CTGCTGGCGG CCAAGGCCAA GAGCCCGGGC GGCACCACCG CGGTCTCCAC CTGCGGCGCC
AATCCGGGCA TGGTGTCGTG GTTCGTCAAG CAGGCACTGG TTGATATCGC GCGCGACACC
GGCACTGAAT ACAACGAGCC GAAGAGCCGC GACGGCTGGG CGCAGCTCGC GCACAAGCTC
GGCGTCAAGG GCATCCACAT CGCCGAGCGC GACACCCAGC GCGCGAAGAA TCCGAAGCCG
ATGGACGTGT TCGTCAACAC CTGGTCGGTG GAAGGCTTCG TCTCCGAGGG GCTGCAGCCG
TCCGAACTCG GCTGGGGCAC CCACGAGACC TGGATGCCGG ACAACGGACG CAAGCACACC
GACGGCTGCG GCGCGGCGAT CTATCTGTTG CAGGCCGGCG CCAACACCCG GGTCCGTTCG
TGGTGCCCGA CGCCGGGCGC GCAATACGGC TTCCTCGTCA CTCACAACGA ATCGATCTCG
ATCGCCGATT ACTTCACGGT GCGCGACGGC CAGAACGTGA TCTACCGGCC GACCTGTCAC
TACGCCTACC ACCCGGCTAA CGACGCCGTG CTGTCGATGC ACGAGATGTT CGGCGCCACC
GGCAAGATGC AGTCGTCCTG GCACATCCTC GACGAGAACG AGATCGTCGA CGGCATCGAC
GAACTCGGCG TGCTGGTCTA CGGCCACGCC AAGAACGCCT ATTGGTTCGG CTCGCAACTC
TCGATCGAGG AAACCCGCCG GATCGCCCCG TATCAGAACG CCACGGGCCT GCAGGTGTCG
TCGGCGGTGA TCGCCGGCAT GGTCTGGGCG CTGGAGAATC CCGAAGCCGG CATCGTCGAG
GCCGACGAGA TGGACTACAA GCGCTGCCTC GAGGTGCAGA GGCCGTATCT CGGCCCGGTC
AAGGGCTACT ATACCGACTG GACTCCGCTC AGCGATCGCC CTGGCCTGTT CCCCGAGGAC
ATCGACACCT CGGACCCGTG GCAGTTCCGC AACGTCCTGG TCCGCTGA
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| Protein sequence | MTAHPVHARI DGPIVMIGFG SIGKGALPLI ERHFAYDKKR FVIIDPHADD ELARKHGVRF
IKQAVTRDNY HELLIPLLTE GGGQGFCVNL SVDTGSVDLM TMCREIGALY IDTVVEPWLG
FYFDKSAGPE KRSNYALRET LLAAKAKSPG GTTAVSTCGA NPGMVSWFVK QALVDIARDT
GTEYNEPKSR DGWAQLAHKL GVKGIHIAER DTQRAKNPKP MDVFVNTWSV EGFVSEGLQP
SELGWGTHET WMPDNGRKHT DGCGAAIYLL QAGANTRVRS WCPTPGAQYG FLVTHNESIS
IADYFTVRDG QNVIYRPTCH YAYHPANDAV LSMHEMFGAT GKMQSSWHIL DENEIVDGID
ELGVLVYGHA KNAYWFGSQL SIEETRRIAP YQNATGLQVS SAVIAGMVWA LENPEAGIVE
ADEMDYKRCL EVQRPYLGPV KGYYTDWTPL SDRPGLFPED IDTSDPWQFR NVLVR
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