Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0843 |
Symbol | |
ID | 4021317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 948642 |
End bp | 949406 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637961033 |
Product | ABC transporter related |
Protein accession | YP_567982 |
Protein GI | 91975323 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0700167 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGATGG TCGCGCAACT GCAATTCAAT GATTTGACGT TGGGTTATGA CCGGCATCCG GCAGTCCATC ACCTCAGCGG CGAGATTGCC GCCGGCGCTT TGCTGGCGGT GGTCGGCCCG AACGGCGCCG GCAAGTCCAC TCTATTCCGC GGCATCGTCG GGATCCTCAA GCCGCTCGCT GGCTCGATCG GTCGCGGCGG CGTCGATATC CGCGATATCG CCTATCTGCC GCAGTCCGCC GATATCGACC GCAGCTTTCC GATCTCGGTG TTCGACTTCG TCGGCACCGG GCTGTGGCGG ACCAGCGGAT CGTTCGGCGG GGTCGGCAAA GCGGCGCGGC CGAAGATCGC GAATGCGCTC GCTGCCGTCG GCCTCTCCGG ATTTGAGAAC CGCAATATCG GCACGCTGTC CGGCGGCCAG ACCCAGCGAA TGCTGTTTGC CCGTGTGCTG CTGCAGGATG CGCGCGTCAT CGTGCTGGAC GAGCCGTTCA ACGCCGTCGA CGCCCGCACC ACCGCCGATC TCGTGACGCT GATCGGGCGA TGGCATGATG AGGGCCGCAC CGTGATCGCA GCGCTGCACG ATATGGAGCT GGTTCGCAGC AGTTTCCCGG AGACGCTGCT GCTGGCGCGC ACCGCCGTGG CCTGGGGCCG GACCGACGAG GTGCTGACCA CGGCCAATCA GGCCGAGGCG CGGCGGATGT GCGAGGCCTT CGACGACGGC GCCGCGGCCT GCACCGCCGC CGCCTCACCG GCGCGGGCGG CCTAA
|
Protein sequence | MTMVAQLQFN DLTLGYDRHP AVHHLSGEIA AGALLAVVGP NGAGKSTLFR GIVGILKPLA GSIGRGGVDI RDIAYLPQSA DIDRSFPISV FDFVGTGLWR TSGSFGGVGK AARPKIANAL AAVGLSGFEN RNIGTLSGGQ TQRMLFARVL LQDARVIVLD EPFNAVDART TADLVTLIGR WHDEGRTVIA ALHDMELVRS SFPETLLLAR TAVAWGRTDE VLTTANQAEA RRMCEAFDDG AAACTAAASP ARAA
|
| |