Gene RPD_0843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0843 
Symbol 
ID4021317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp948642 
End bp949406 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content68% 
IMG OID637961033 
ProductABC transporter related 
Protein accessionYP_567982 
Protein GI91975323 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1121] ABC-type Mn/Zn transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0700167 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATGG TCGCGCAACT GCAATTCAAT GATTTGACGT TGGGTTATGA CCGGCATCCG 
GCAGTCCATC ACCTCAGCGG CGAGATTGCC GCCGGCGCTT TGCTGGCGGT GGTCGGCCCG
AACGGCGCCG GCAAGTCCAC TCTATTCCGC GGCATCGTCG GGATCCTCAA GCCGCTCGCT
GGCTCGATCG GTCGCGGCGG CGTCGATATC CGCGATATCG CCTATCTGCC GCAGTCCGCC
GATATCGACC GCAGCTTTCC GATCTCGGTG TTCGACTTCG TCGGCACCGG GCTGTGGCGG
ACCAGCGGAT CGTTCGGCGG GGTCGGCAAA GCGGCGCGGC CGAAGATCGC GAATGCGCTC
GCTGCCGTCG GCCTCTCCGG ATTTGAGAAC CGCAATATCG GCACGCTGTC CGGCGGCCAG
ACCCAGCGAA TGCTGTTTGC CCGTGTGCTG CTGCAGGATG CGCGCGTCAT CGTGCTGGAC
GAGCCGTTCA ACGCCGTCGA CGCCCGCACC ACCGCCGATC TCGTGACGCT GATCGGGCGA
TGGCATGATG AGGGCCGCAC CGTGATCGCA GCGCTGCACG ATATGGAGCT GGTTCGCAGC
AGTTTCCCGG AGACGCTGCT GCTGGCGCGC ACCGCCGTGG CCTGGGGCCG GACCGACGAG
GTGCTGACCA CGGCCAATCA GGCCGAGGCG CGGCGGATGT GCGAGGCCTT CGACGACGGC
GCCGCGGCCT GCACCGCCGC CGCCTCACCG GCGCGGGCGG CCTAA
 
Protein sequence
MTMVAQLQFN DLTLGYDRHP AVHHLSGEIA AGALLAVVGP NGAGKSTLFR GIVGILKPLA 
GSIGRGGVDI RDIAYLPQSA DIDRSFPISV FDFVGTGLWR TSGSFGGVGK AARPKIANAL
AAVGLSGFEN RNIGTLSGGQ TQRMLFARVL LQDARVIVLD EPFNAVDART TADLVTLIGR
WHDEGRTVIA ALHDMELVRS SFPETLLLAR TAVAWGRTDE VLTTANQAEA RRMCEAFDDG
AAACTAAASP ARAA