Gene RPD_0839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0839 
Symbol 
ID4021313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp943706 
End bp944770 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content62% 
IMG OID637961029 
Productbeta-lactamase-like 
Protein accessionYP_567978 
Protein GI91975319 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.228122 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATAAGA AAAACGACGC CGTCGACAAA CCCCACGACG ATTTGCGCTT TCCGCTGGAG 
AGCCACCCCG GCCCGCACGA GGCTGTCGAG ATCGCGCCCG GCGTGTTGTG GCTGCGGCTT
AAACTGCCGT TCCGCCTCAA CCATGTGAAC ATCTATCTGC TCGCCGATGG TGACGGCTGG
GCCATGGTCG ATACCGGCTT CGGCAACGAC ACCACGATCG CGGCGTGGGA GACGCTGTTC
GACGGCGCGC TCAAAGGCTT CAGCATCAGC CGGGTGATCG TGACCCACGC TCACCCCGAC
CATTTCGGCC AGGCCGGCTG GCTCGTTCAG CGTTTCCGCT GTCCGTTTTA CATGTCGCAG
ATCGAGTATC TGCAGGGCGT CTACCATCAA AACCGCCGCA CCGAGGAGCG CCTCGTCAAT
TCGCGCGAAT TCTTCCACCG CCACGGCATG GACGAGACGA TCACCGCGCA ATTGCTCGGC
CGCGGGCAGG ACTATCTGAA ACGCACGGTG CCGCTGCCGG CGGCGTATCG CCGGCTCACC
AAGGGCGACG ATATCCAGAT CGGCGCGCGA AGCTTTCGCA TCATCACCGG CGCCGGCCAC
TCGCCGGATC AGGTGATGCT GTATTGCGCC GCCGACAAAC TGTTTCTGTC GGCCGATCAG
GTGCTGAGCA AGATCTCTCC CAATGTCAGC GTCTGGGCCC ACGAGCCGGA CGAAAACGCG
CTCGGCTCTT ATCTGACGTC ACTCGCCGAG CTGGCGACGA TCCTGCCCGA CGACGTGCTG
GTGCTGCCCG GTCACGGCCT GCCGTTCTAC GGCGTCAAGA CCCGCATCAA GCAACTCGCC
GATCACCACG AGGAACGCTG CGACATGATC GCGGACGCCT GCCGAGACGC AGCGATGAGT
TCCGCAGAAC TGGTGCCGGT GGTATTCCAC AAACACGTAC TGGATGCACA TCAGACCGGG
TTCGCCGCTG GCGAACTGAT CGCGCATGTG AACTACATGC TTGTGAAGAA GCGCCTGCAG
ATCGTCGACA GCTCCGACGG CATCCTGCGC TTCAAGGCCG GTTAA
 
Protein sequence
MHKKNDAVDK PHDDLRFPLE SHPGPHEAVE IAPGVLWLRL KLPFRLNHVN IYLLADGDGW 
AMVDTGFGND TTIAAWETLF DGALKGFSIS RVIVTHAHPD HFGQAGWLVQ RFRCPFYMSQ
IEYLQGVYHQ NRRTEERLVN SREFFHRHGM DETITAQLLG RGQDYLKRTV PLPAAYRRLT
KGDDIQIGAR SFRIITGAGH SPDQVMLYCA ADKLFLSADQ VLSKISPNVS VWAHEPDENA
LGSYLTSLAE LATILPDDVL VLPGHGLPFY GVKTRIKQLA DHHEERCDMI ADACRDAAMS
SAELVPVVFH KHVLDAHQTG FAAGELIAHV NYMLVKKRLQ IVDSSDGILR FKAG