Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0839 |
Symbol | |
ID | 4021313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 943706 |
End bp | 944770 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637961029 |
Product | beta-lactamase-like |
Protein accession | YP_567978 |
Protein GI | 91975319 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.228122 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATAAGA AAAACGACGC CGTCGACAAA CCCCACGACG ATTTGCGCTT TCCGCTGGAG AGCCACCCCG GCCCGCACGA GGCTGTCGAG ATCGCGCCCG GCGTGTTGTG GCTGCGGCTT AAACTGCCGT TCCGCCTCAA CCATGTGAAC ATCTATCTGC TCGCCGATGG TGACGGCTGG GCCATGGTCG ATACCGGCTT CGGCAACGAC ACCACGATCG CGGCGTGGGA GACGCTGTTC GACGGCGCGC TCAAAGGCTT CAGCATCAGC CGGGTGATCG TGACCCACGC TCACCCCGAC CATTTCGGCC AGGCCGGCTG GCTCGTTCAG CGTTTCCGCT GTCCGTTTTA CATGTCGCAG ATCGAGTATC TGCAGGGCGT CTACCATCAA AACCGCCGCA CCGAGGAGCG CCTCGTCAAT TCGCGCGAAT TCTTCCACCG CCACGGCATG GACGAGACGA TCACCGCGCA ATTGCTCGGC CGCGGGCAGG ACTATCTGAA ACGCACGGTG CCGCTGCCGG CGGCGTATCG CCGGCTCACC AAGGGCGACG ATATCCAGAT CGGCGCGCGA AGCTTTCGCA TCATCACCGG CGCCGGCCAC TCGCCGGATC AGGTGATGCT GTATTGCGCC GCCGACAAAC TGTTTCTGTC GGCCGATCAG GTGCTGAGCA AGATCTCTCC CAATGTCAGC GTCTGGGCCC ACGAGCCGGA CGAAAACGCG CTCGGCTCTT ATCTGACGTC ACTCGCCGAG CTGGCGACGA TCCTGCCCGA CGACGTGCTG GTGCTGCCCG GTCACGGCCT GCCGTTCTAC GGCGTCAAGA CCCGCATCAA GCAACTCGCC GATCACCACG AGGAACGCTG CGACATGATC GCGGACGCCT GCCGAGACGC AGCGATGAGT TCCGCAGAAC TGGTGCCGGT GGTATTCCAC AAACACGTAC TGGATGCACA TCAGACCGGG TTCGCCGCTG GCGAACTGAT CGCGCATGTG AACTACATGC TTGTGAAGAA GCGCCTGCAG ATCGTCGACA GCTCCGACGG CATCCTGCGC TTCAAGGCCG GTTAA
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Protein sequence | MHKKNDAVDK PHDDLRFPLE SHPGPHEAVE IAPGVLWLRL KLPFRLNHVN IYLLADGDGW AMVDTGFGND TTIAAWETLF DGALKGFSIS RVIVTHAHPD HFGQAGWLVQ RFRCPFYMSQ IEYLQGVYHQ NRRTEERLVN SREFFHRHGM DETITAQLLG RGQDYLKRTV PLPAAYRRLT KGDDIQIGAR SFRIITGAGH SPDQVMLYCA ADKLFLSADQ VLSKISPNVS VWAHEPDENA LGSYLTSLAE LATILPDDVL VLPGHGLPFY GVKTRIKQLA DHHEERCDMI ADACRDAAMS SAELVPVVFH KHVLDAHQTG FAAGELIAHV NYMLVKKRLQ IVDSSDGILR FKAG
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