| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0838 |
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| Symbol | |
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| ID | 4021312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 942265 |
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| End bp | 943494 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637961028 |
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| Product | 5-aminolevulinate synthase |
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| Protein accession | YP_567977 |
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| Protein GI | 91975318 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes |
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| TIGRFAM ID | [TIGR00858] 8-amino-7-oxononanoate synthase
[TIGR01821] 5-aminolevulinic acid synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.876251 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATACA ACAAATTCTT CGAAGACGCC GTCGCCCGCT TGCACGACGA GCGCCGTTAT
CGCGTTTTCG CCGATCTCGA GCGGATCGCC GGCAGATTTC CATACGCCGT CTGGCACTCG
CAGACCGGTC CTCGCGATGT CGTGATCTGG TGCTCGAACG ATTACCTCGG CATGGGTCAG
CACCCGAAGG TGGTCGGCGC GATGGTCGAG ACCACCACCC GGATCGGCAC CGGCGCCGGC
GGCACCCGCA ACATCGCGGG CACGCACCAT CCGCTGGTTC AGCTCGAGGC GGAAATCGCC
GACCTGCACG GCAAGGAAGC GGCGCTGCTG TTCACGTCGG GCTACGTGTC CAACCAGACC
GGCCTGTCGA CGCTCGGCAA GCTGATCCCG AACTGTCTGA TCCTGTCGGA CGCGCTCAAC
CACAATTCGA TGATCGAGGG CATCCGCCAG TCCGGCTGCG AGCGCGTGGT GTGGCGCCAC
AACGATACCG CGCATCTCGA AGAGCTGCTG ATCGCCGCAG GTCCGGACCG GCCGAAGCTG
ATCGCATTCG AGAGCCTGTA CTCGATGGAC GGCGACATCG CGCCGCTTTC GAAGATCTGC
GATCTCGCCG AGAAGTACAA CGCGATGACC TACTGCGACG AAGTCCACGC AGTCGGCATG
TACGGGCCCC GCGGCGCCGG CGTCGCGGAA CGCGACGGCG TGATGCATCG TATCGACATC
ATGGAAGCGA CGCTGGCCAA GGCATTTGGC TGCCTCGGCG GCTACATCGC CGGCAAGGCC
GAGGTGATCG ACGCCGTGCG CTCCTACGCG CCGGGCTTCA TCTTCACCAC CGCGCTGCCG
CCGCCGATCT GTGCCGCCGC GACCGCCGCG ATCAAGCACC TCAAATCTTC GTCGTGGGAG
CGTGAGCGCC ACCAGGACCG CGCCGCGCGG GTCAAGGCCG TGCTCAACAA CGCCGGCATC
CCTGTGATGC CGACCGACAC CCACATCGTG CCGGTGTTCG TCGGCGACGC CGAGAAGTGC
AAGAAAGCGT CCGACCTGCT GCTGGAACAG CACGGCATCT ATATCCAGCC GATCAACTAT
CCGACCGTCG CACGCGGCCT CGAGCGGCTG CGGATCACGC CGTCGCCGTA TCATGACGAC
AAGCTGATCG ACGCGCTGGC GGAAGCACTG GTGCAGGTCT GGGGCCAGCT CGGCCTGCCG
CTCGGCGCCA AGGCGATCGC GGCGGAGTAG
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| Protein sequence | MQYNKFFEDA VARLHDERRY RVFADLERIA GRFPYAVWHS QTGPRDVVIW CSNDYLGMGQ
HPKVVGAMVE TTTRIGTGAG GTRNIAGTHH PLVQLEAEIA DLHGKEAALL FTSGYVSNQT
GLSTLGKLIP NCLILSDALN HNSMIEGIRQ SGCERVVWRH NDTAHLEELL IAAGPDRPKL
IAFESLYSMD GDIAPLSKIC DLAEKYNAMT YCDEVHAVGM YGPRGAGVAE RDGVMHRIDI
MEATLAKAFG CLGGYIAGKA EVIDAVRSYA PGFIFTTALP PPICAAATAA IKHLKSSSWE
RERHQDRAAR VKAVLNNAGI PVMPTDTHIV PVFVGDAEKC KKASDLLLEQ HGIYIQPINY
PTVARGLERL RITPSPYHDD KLIDALAEAL VQVWGQLGLP LGAKAIAAE
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