Gene RPD_0832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0832 
Symbol 
ID4021306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp933919 
End bp934542 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content66% 
IMG OID637961022 
ProductDSBA oxidoreductase 
Protein accessionYP_567971 
Protein GI91975312 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3917] 2-hydroxychromene-2-carboxylate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.109338 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCGTC AGATCGACTA TTATTTCTCG TTCCAGTCGC CCTGGGCCTA TATCGGCCAT 
CAGGCGTTCA GGCGGCTCGT CGAAGCCCAT GATCTCGCAG TCAATTACAA GCCGGTGCTG
TTGACCGGGC TGTTCTCCGA GACCGGCGGC CTGCCGCTCG CCAAGCGCCA TCCGGCGCGG
CAGCGTTATC GGCTGGTCGA GCTGCAGCGC TGGCGCGAGA AGCGCGGGCT GGATTTCAAA
CTATGGCCGA AGCACTGGCC GTTCGACGCC CGTCTCGCCG ACGGTGTCGT GCTGGCTGTG
GTCGCGGCCG GGCTCGATCC GGAGCTATAT TTGCAGCAGG CCTATGCGGC GGTGTGGGAG
CGCGAACTCG ACCTTGCCGA CCCTGCGGTG CTGATCACGC TCGCTGACGA CGCCGGCCTT
CCGGGCGAAA AGCTGGTGGC GCATGCGGCG TCTGACCAGA CCCGCGATGC CTATGAGCAG
AATCGGCAGG ACGCGATGGC GGCCGACGTG TTCGGCTCGC CGGCTTACGT GCTCGATGGC
GAGGTGTTCT GGGGGCAGGA CCGGATCGAA CTGCTGTCCG ACGCCTTGAA ATCCGGCCGC
GGCCCGTACC GTCCGCCGCG TTGA
 
Protein sequence
MSRQIDYYFS FQSPWAYIGH QAFRRLVEAH DLAVNYKPVL LTGLFSETGG LPLAKRHPAR 
QRYRLVELQR WREKRGLDFK LWPKHWPFDA RLADGVVLAV VAAGLDPELY LQQAYAAVWE
RELDLADPAV LITLADDAGL PGEKLVAHAA SDQTRDAYEQ NRQDAMAADV FGSPAYVLDG
EVFWGQDRIE LLSDALKSGR GPYRPPR