Gene RPD_0828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0828 
Symbol 
ID4021302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp931521 
End bp932078 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content66% 
IMG OID637961018 
ProductH+-transporting two-sector ATPase, B/B' subunit 
Protein accessionYP_567967 
Protein GI91975308 
COG category[C] Energy production and conversion 
COG ID[COG0711] F0F1-type ATP synthase, subunit b 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.185146 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGAAG GTCATGGCGA TGCGAAGGGC GCAACCGCCC ACACGGCGGC CGACGGAGGC 
CACAAGGCTC CGTTTCCGCC GTTCCAGAAG GAAACCTTTG CCTCGCAATT GGTGTCGCTG
ACGATCGCCT TCGTCGCGCT CTATCTGATC GTGTCCAAGA TCATCTTGCC GCGCGTCGGC
GGGGTGATCG AAGAGCGCCA GAAGACGATC GAGGGCGATC TGGCGGCGGC CCAGAAGCTG
AAGGGCGAAT CGGACGACGC GCTGAAGGCC TATGAGGCCG AACTCGCCCA GGCCCGCTCC
CGGGCCCAGG CGATCGGCGC AGAGACCCGC GAAAAGCTGA ACGCGGCGGC GGAAGCCGAG
CGCAAGACGC TGGAACAGCG GCTGGCGGCG AAGATCGCCG ACGCCGAGAA GACCATCTCG
GCGACCCGTA CCGCCGCGAT GGGCAACGTT CGCGGCATCG CCTCCGAGGC AGCCGCCGCG
ATCGTTCAGC AGCTTGCCGG CATTCAGCCG GACAGCAAGG CGCTGGATAG CGCGGTCAAC
GCTTCAATCA AGGGCTGA
 
Protein sequence
MAEGHGDAKG ATAHTAADGG HKAPFPPFQK ETFASQLVSL TIAFVALYLI VSKIILPRVG 
GVIEERQKTI EGDLAAAQKL KGESDDALKA YEAELAQARS RAQAIGAETR EKLNAAAEAE
RKTLEQRLAA KIADAEKTIS ATRTAAMGNV RGIASEAAAA IVQQLAGIQP DSKALDSAVN
ASIKG