Gene RPD_0824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0824 
Symbol 
ID4021298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp928231 
End bp928818 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content67% 
IMG OID637961014 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_567963 
Protein GI91975304 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.202101 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTGT TTCGAATGCC GTCCGCAGGT CCCGCCGCTT TGGCGCCGCG TGGCCACGGG 
CTGTTGCTGC GCTCTCCCCA GATGGCCGAT TATCCGCAAT GGGCCGAGCT GCGCGACCGG
AGCCGCGCTT ACCTCGCGCC GTGGGAGCCG ATCTGGCCGT CGGATGATCT GACCCGCTCG
GGCTTCCGCC GCCGGCTCCG GCGCTACGCC GAAGACATTG CCGCCGACCG CTCCTATCCC
TTCCTGGTGT TTCGCGAGAC CGATGGCGAA TTGATCGGCG GCGTGACGCT GGCCAATGTC
CGCCGCGGCA TCGTCCAGGC CGGCACGATC GGCTATTGGG TCGGCCAGCC GCATGCCGGT
CTCGGTTACA TGACGGCGGC GTTGCGGGTT TTGCTGCCCA CGCTTTTCGG CGAGCTCAAT
CTGCATCGCG TCGAGGCTGC CTGCATCCCC ACCAACGCGC CGTCGATCCG CGTGCTGGAG
AAATGCGGCT TCACCCGCGA GGGGCTGGCG AGGCGTTATC TCTGCATCAA CGGGGTGTGG
CAGGACCACC TGCTGTTCGG CCTGCTGCAC GAGGATTTTC GCGGCTGA
 
Protein sequence
MALFRMPSAG PAALAPRGHG LLLRSPQMAD YPQWAELRDR SRAYLAPWEP IWPSDDLTRS 
GFRRRLRRYA EDIAADRSYP FLVFRETDGE LIGGVTLANV RRGIVQAGTI GYWVGQPHAG
LGYMTAALRV LLPTLFGELN LHRVEAACIP TNAPSIRVLE KCGFTREGLA RRYLCINGVW
QDHLLFGLLH EDFRG