Gene RPD_0821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0821 
Symbol 
ID4021295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp924503 
End bp925309 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content71% 
IMG OID637961011 
Productputative surfeit 1 
Protein accessionYP_567960 
Protein GI91975301 
COG category[S] Function unknown 
COG ID[COG3346] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.314622 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTGT CGCCCTCGCG CCGGCGCGGC ATCGCCGGAA TGAGCCTGAT CGCGCTCCTG 
ATCGTCGCGG TGTTGCTGTC GCTCGGCTTC TGGCAGTTGC AGCGCCGCAC CGCGAAGCAC
GCGCTGATCG CGGCGCTGAC CGAGCGCCTC GCCGTCGCGC CGGTCGCATT GCCGTCTCCC
GCCGCGTGGC CGTCGCTCAA TCCCGCCGCC GATGAATTCC GCCGCGTCAG CTTCACCGCG
ACCTATGCGA AGCAGCCGGA TGCGATGGTG TATTCGTCCG GCTCCGCGGT GCGCGGCGAC
ATTTCCGGGC CGGGCACCTG GGCGTTTCTG CCGGCGCAAT TGCCGGGCGG CGAGACCGTC
GTGGTCAATG CCGGCTTTGT GCCGAACACC ATGCAGGACC GTGGCTACGA GGACCGCGTG
GTGGCGCCGC TCGTCACCGG CCAGCCGGTG ACGCTCACCG GCTATCTGCG CTTCCCGGAA
ACCGCCGGGA TGTTGACGCC CGAGCCGGAC ATCGCCAAGC GGCTGTGGTT CACCCGCGAC
GTGGCGGCGA TGGCCGACCG GCTCGGCTGG GCCGGGGGCG CGCGTCCTGC GCCGTTCTAT
CTCGATCTGG AGTCGCCGGT GCCGGCCAAT GGCCTGCCCA AGCCCGGGCC GCTCGGCGTC
TATTTGCGCG ACCAGCACAT CCAATACGCC ATCACCTGGT TCGGCCTGGC CTTCGCGGTG
GTGGTCGCCT TTGCGTTCTG GCTGCGCGGC CAGTGGCGGG CCCGGCCCGC TGCGCCGGCT
GGCCGGGCGT CGCGCCGCAT TGCGTGA
 
Protein sequence
MTVSPSRRRG IAGMSLIALL IVAVLLSLGF WQLQRRTAKH ALIAALTERL AVAPVALPSP 
AAWPSLNPAA DEFRRVSFTA TYAKQPDAMV YSSGSAVRGD ISGPGTWAFL PAQLPGGETV
VVNAGFVPNT MQDRGYEDRV VAPLVTGQPV TLTGYLRFPE TAGMLTPEPD IAKRLWFTRD
VAAMADRLGW AGGARPAPFY LDLESPVPAN GLPKPGPLGV YLRDQHIQYA ITWFGLAFAV
VVAFAFWLRG QWRARPAAPA GRASRRIA