Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0821 |
Symbol | |
ID | 4021295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 924503 |
End bp | 925309 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637961011 |
Product | putative surfeit 1 |
Protein accession | YP_567960 |
Protein GI | 91975301 |
COG category | [S] Function unknown |
COG ID | [COG3346] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.314622 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGTGT CGCCCTCGCG CCGGCGCGGC ATCGCCGGAA TGAGCCTGAT CGCGCTCCTG ATCGTCGCGG TGTTGCTGTC GCTCGGCTTC TGGCAGTTGC AGCGCCGCAC CGCGAAGCAC GCGCTGATCG CGGCGCTGAC CGAGCGCCTC GCCGTCGCGC CGGTCGCATT GCCGTCTCCC GCCGCGTGGC CGTCGCTCAA TCCCGCCGCC GATGAATTCC GCCGCGTCAG CTTCACCGCG ACCTATGCGA AGCAGCCGGA TGCGATGGTG TATTCGTCCG GCTCCGCGGT GCGCGGCGAC ATTTCCGGGC CGGGCACCTG GGCGTTTCTG CCGGCGCAAT TGCCGGGCGG CGAGACCGTC GTGGTCAATG CCGGCTTTGT GCCGAACACC ATGCAGGACC GTGGCTACGA GGACCGCGTG GTGGCGCCGC TCGTCACCGG CCAGCCGGTG ACGCTCACCG GCTATCTGCG CTTCCCGGAA ACCGCCGGGA TGTTGACGCC CGAGCCGGAC ATCGCCAAGC GGCTGTGGTT CACCCGCGAC GTGGCGGCGA TGGCCGACCG GCTCGGCTGG GCCGGGGGCG CGCGTCCTGC GCCGTTCTAT CTCGATCTGG AGTCGCCGGT GCCGGCCAAT GGCCTGCCCA AGCCCGGGCC GCTCGGCGTC TATTTGCGCG ACCAGCACAT CCAATACGCC ATCACCTGGT TCGGCCTGGC CTTCGCGGTG GTGGTCGCCT TTGCGTTCTG GCTGCGCGGC CAGTGGCGGG CCCGGCCCGC TGCGCCGGCT GGCCGGGCGT CGCGCCGCAT TGCGTGA
|
Protein sequence | MTVSPSRRRG IAGMSLIALL IVAVLLSLGF WQLQRRTAKH ALIAALTERL AVAPVALPSP AAWPSLNPAA DEFRRVSFTA TYAKQPDAMV YSSGSAVRGD ISGPGTWAFL PAQLPGGETV VVNAGFVPNT MQDRGYEDRV VAPLVTGQPV TLTGYLRFPE TAGMLTPEPD IAKRLWFTRD VAAMADRLGW AGGARPAPFY LDLESPVPAN GLPKPGPLGV YLRDQHIQYA ITWFGLAFAV VVAFAFWLRG QWRARPAAPA GRASRRIA
|
| |